Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0354 ATGGCTGTTGAATCAAACCAAACTAACGAATTCATTTTCCGTTCAAAGCTTCCCCATATTCACATTCCCAATCATCTCCCACTCCACGAATACGTTTTCCAAAATCTCCCCAAATTTGCCTCACGCCCCTGTTTGATCAACGGCGCCACCGGCGATGTTTACTCCTACAGCGACCTTCACCTAACGGCCCGTCGAGTCGCCGCCGGCCTACACAGCCTCGGAATTAATAAGGGCGATGTCGTCATGAATTTGCTTCCCAACTCCCCGGAGTTCGTCTTCACCTTCCTCGCCGCGTCGTACCGGGGCGCCATCATGACGGCGGCGAACCCTTTTTACACGGCAGTGGAAATTGCAAAACAGGCCAAAGCCGCCAATGCGAAGTTGATCGTGACCATGGCTTGCTTCTACGATCGGGTTAAGGATTTGGCTGAAAATGGTGTCAAAATTGTATGCGTTGATTTTGCTGTCGAGGGTTGTTTGCATTTCTCTGTTTTGAGTGGGGCTGATGAATCTAATGCGCCGCCGGTTGATTTTTCCCCTGACGACGTGGTGGCGCTGCCGTACTCCTCCGGCACCACCGGTTTGCCGAAGGGAGTCATGTTAACTCACAAAGGGCTAATCACAAGCGTGGCTCAACAAATGGACGGCCAAAATCCGAACCTCTATTATCACGGCGATGATGTTATCCTCTGTGTGCTGCCGTTTTTCCACATTTATTCACTCAATTCCATTTTGCTGTGTGGGCTACGCGTCGGTGCTGCGATTGTGATTATGCAGAAATTTGACATCGTTTCTCTCTTGCAATTGATTGAGAAATACAGAATCTCGATCATGCCCATCGTCCCGCCGATCTTTTTGGCCATTGCTAAGTCGCCGGAATTTGAGAAATACGACGTGTCGTCAGTGAGGGTTCTCAAATCCGGTGGAGCTCCACTGGGGAAGGAGCTGGAAGACGCCGTGCGGGAGAAATTTCCGGCGGCGGTTCTCGGACAGGGGTATGGAATGACCGAGGCCGGTCCGGTTCTGAGTATGAGTTTAGCTTTTGCGAAAGAGCCGTTCGAAGTGAAAGCCGGAGCTTGTGGAACTGTGGTCCGAAATGCAGAGATGAAGATTGTCGACCCAGAAACCGGCGCGTCCTTGCCGGCGAATTCGGCCGGAGAGATTTGTATTAGAGGTGATCAGATCATGAAGGGGTATTTGAATGATTTGGAGTCAACAAAGAGGACTATTGATAAAGAAGGATGGCTTCACACCGGTGACATAGGGTTCGTGGACGACGACGATGAGATCTTCATTGTAGACCGGCTTAAGGAACTTATTAAATTTAAGGCCTTTCAAGTGGCGCCCGCCGAGCTGGAGGCCCTTCTTATCACCCACCCAAAACTATCTGACGCTGCTGTTATTGGTATGCCGGACGTGGAGGCCGGAGAAGTGCCGGTGGCGTTTGTGGTGAAGGCGAATGGCGGCGCAATATCAGAGGAAGAGGTAAAGCAATTCATAACAAAACAAGTGGTGTTCTACAAGAGGCTAAAACGTGTGTTTTTCGTCAAAGCAATTCCAAAAGCTCCATCTGGAAAAATCCTTAGAAAAGAACTCAGAGCCAAACTGGCTTCTGGTGCTTACAATTAA 1629 49.97 MAVESNQTNEFIFRSKLPHIHIPNHLPLHEYVFQNLPKFASRPCLINGATGDVYSYSDLHLTARRVAAGLHSLGINKGDVVMNLLPNSPEFVFTFLAASYRGAIMTAANPFYTAVEIAKQAKAANAKLIVTMACFYDRVKDLAENGVKIVCVDFAVEGCLHFSVLSGADESNAPPVDFSPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQMDGQNPNLYYHGDDVILCVLPFFHIYSLNSILLCGLRVGAAIVIMQKFDIVSLLQLIEKYRISIMPIVPPIFLAIAKSPEFEKYDVSSVRVLKSGGAPLGKELEDAVREKFPAAVLGQGYGMTEAGPVLSMSLAFAKEPFEVKAGACGTVVRNAEMKIVDPETGASLPANSAGEICIRGDQIMKGYLNDLESTKRTIDKEGWLHTGDIGFVDDDDEIFIVDRLKELIKFKAFQVAPAELEALLITHPKLSDAAVIGMPDVEAGEVPVAFVVKANGGAISEEEVKQFITKQVVFYKRLKRVFFVKAIPKAPSGKILRKELRAKLASGAYN 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3882537 3884280 + CaPI482276_09g003540.1 Cam09g0354 134683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0354 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 533 - GO:0016405(PANTHER)
Cam09g0354 542 CDD 4CL 22 532 - -
Cam09g0354 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 437 - -
Cam09g0354 542 FunFam 4-coumarate--CoA ligase 2 438 539 - -
Cam09g0354 542 SUPERFAMILY Acetyl-CoA synthetase-like 15 538 - -
Cam09g0354 542 Pfam AMP-binding enzyme 37 400 IPR000873 -
Cam09g0354 542 Gene3D - 437 538 IPR045851 -
Cam09g0354 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Cam09g0354 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Cam09g0354 542 Gene3D - 3 436 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0354 Cam-Chr9:3882537 Cam10g1398 Cam-Chr10:27656377 3.40E-224 dispersed
Cam09g0353 Cam-Chr9:3875424 Cam09g0354 Cam-Chr9:3882537 1.8e-310 tandem
Cam09g0354 Cam-Chr9:3882537 Cam09g0355 Cam-Chr9:3891845 3.90E-289 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0354 K01904 - csv:101218121 986.482