Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0356 ATGCCTCTCTCTAGTTGTGTCAAGGGTCCCACATTACCGGCCCCACCGGCCACCACCACCATGTGTGACTGCGCAAGGGAGCTGAAATTTCATAATAGAGAAATCAGCAAGGGGACTCCGGTGAATATAATTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGAAGGGCAAGTTACAGAAATTAATGGCAAAAATGCTACTATACTCACTACCAATGAAAAAACTATTGTTGCAGAAATTTCGAGTATATATCCGAAAGACACGGAGGCGCCGCCGGCGGGGGTTGACGACATGACAAAATTGGCGTATCTTCATGAACCGGGAGTTCTGCATAACCTAGCTTGTCGATTTTCTCTCAATGAAATATACACATACACCGGGAATATTCTAATTGCGGTGAATCCTTTCCGGCGACTGCCCCATTTGTATGATATTCACATGATGGAACAATATAAAGGAGCTCCTTTCGGCGAACTTAGTCCACATCTTTTCGCTGTTGCAGATGCTTGCTATAGATCGATGATTAACGAGCAAGGAAGTCAGTCCATATTAGTGAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACAAAGATGCTCATGAGATATCTTGCATTCATGGGAGGCAGGTCAGATACTGAAGGAAGAACAGTTGAACAACAGGTTTTGGAGTCCAACCCTGTACTGGAAGCATTTGGAAATGCCAAAACCGTCAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACATACCTTCTCGAACGGTCACGTGTTTGCCAAGTCTCAGACCCTGAGAGAAACTACCATTGTTTTTACATGCTCTGTGCAGCACCACCAGAAGATGTCAAGAAATTCAAGTTAGGAGACCCGAGGACATTTCATTATCTTAATCAAACGAATTGTTATGAAGTGGCGAATGTCGATGATGCAAGAGAGTACTTAGAGACGAGAAATGCCATGGATGTTGTCGGAATCAGCCAGGAGGAACAGGATGCTATATTTCGTGTTGTAGCTTCAATACTGCATCTTGGAAACATCAACTTCATGAAAGGGAAGGAAGTTGACTCTTCCAAAGTGAAAGACGAGAAGTCTAATTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTGAAGGCACTGGAACATTCGCTCTGCCAGCGTGTCATAGTGACTCCAGATGGCAACATTACAAAGCCTTTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCCAGTTTAATTGGAGTTCTTGATATTTATGGTTTTGAAAGCTTCAAGATCAACAGTTTTGAGCAGCTCTGTATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTATACGAAGGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTCCTTGATCTTATTGAGAAGAAACCTGGAGGTATAATCGCCCTGCTTGATGAAGCCTGTATGTTTCCAAAGTCAACACACGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAGACTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGATCAATTTCTTGATAAAAACAAGGACTATGTAGTAGCAGAACATCAGGCTCTTCTAAATGCCTCACGATGCTCTTTTGTTGCTAATCTTTTCCCTCCACTTCCTGAGGAGAGCTCAAAGCAATCCAAATTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTACAAGCTCTCATGGAAACATTGAATACTACAGAACCACATTATATTAGATGTGTAAAGCCCAACACAGTTTTGAAACCTGGCATCTTTGAGAACTTCAACGTGTTGAACCAATTGAGGTGTGGGGGAGTGCTCGAGGCAATTAGGATAAGTTGTGCAGGATATCCAACAAAAAGAACATTTGATGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTCGGATGGCTCTGATGAAAAATCAGCATGCATTGCAATATGTGACAGAATGGGCTTAAAAGGTTATCAGATTGGAAAAACAAAAGTGTTCCTCAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATTTTGGCTAATGCTGTCAGACGCATCCAGCGGCAAATACGAACCCATCTAACTAGGAAAGAGTTTATCGCCCTGAGGAGGGCTACAATTCATATACAGAAACTTTGGAGAGGGCAACTTGCTCGTAAGCTGTATGAGCAAATGAGGAGAGAAGCAGCTTCAATCCGTATACAGAAGCATGCACGTGCTCACGCAGATAGAAAATCTTACAAAAAATTACTTGCATCAGCTATAGTTATTCAGACTGGTATGCGTGCAATGGCAGCTAGAAATGAGTACAGACACAGAAGAAGAACTAAGGCAGCTATCATTGTTCAGACTGAATGGCGGAGGGCATCAGCTATTTCAGCTTACAAACAGCAGCAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGATCTAAAGTTGCAAGGAAGGAGCTTAGAAAATTAAAGATGGCTGCAAGAGAAACAGGAGCACTCAAGGAGGCGAAGGACAAATTGGAGAAACGTGTCGAGGAGCTAACATGGCGCCTAGAGTTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCTAAGGGGCAAGAGGTTGCAAAATTACAAAATGCTTTGGAAGAAATGCAAGGCCAGCTGGATGAAGCCAATGCTGCAATTATACGTGAGAGAGAAGCAGCAAAATTGGCCATAGAACAAGCCCCACCAGTCATTAAGGAAGTACCTGTGGTTGACGAGACCAAGCTAGAAATGCTGAGAAATCATAATGAAGAACTTGAGGGGGAGGTTGGAGAGCTGAAGAAGAAAATTGAGGAATTTGAAGAAAAGTATGCTGAAGTGGAAAAGGAGAGTAAAGCTAGGCTCAAGGAGGCAGAAGAGGCACATTTGAAATCGTTGCAACTTCAAGAGGCTATTGAGAGATTGGAATCAAATTTATCTAGCCTTGAGTCTGAGAACCAGGTTCTGCGCCAGCAGGCTTTGGTTGCAGCAGACAATGAGTCCCTCTCTGAAGAAGTGCAAGCCCTCAAGAGTAAGATTGGAAGTCTAGAGGCAGAGAATGAAGTTCTCCGCAACCGGCCAGTGGCTGTTGAGCATATATCTGTTCCCGCTGGAGCGCTTACAGAAAGCAAGACTTTAGATAACGGACATGTTAAGGAAGAGGAGAATAAATCAACTAAGGAACCATCTACTGTTCCCATCCTAGTTAAACAAGGTTCGCTTACAGAAAAGCAACAGGAAAATCATGATGTCCTGCTCAAGTGCTTAGCAGAAGACAAGCGTTTTGACAAGGGCAGACCAGTTGCAGCCTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGAGAAAACAAATATATTTGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGCGATTTTGCATATTGGCTTTCAACCACTTCCACCCTTCTCTATCTTCTTCAAAGTTCACTCAAGGCAACCAATACAAGTACTGTAGCTTCACATCGCAACCGAGCTTCACCTGCAACTTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCAGTGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGCAAGACAAACAATCAGTCTAAAGTTGAAGCCAAGTACCCAGCACTTCTTTTTAAGCAACATCTGGCAGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAATTTGAAGAAAGAAATTAGTCCTTTCTTGCATCTATGTATTCAGGCACCAAGATCAGTGAAGTCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAACATTGTTGCAAAACAACAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAAGCTAGACCAAACGTTGGATATAATGTCTGAAAACCATGTTCCCTCCATGATCATGAGAAAAATCTTCTTCCAAGTTTTCTCATTCATAAATGTCCAGCTTTTCAATAGCTTGTTACTACGACGTGAGTGTTGTTCCTTCAGTAATGGAGAGTACTTGAAGTTGGGTCTGCAGGAGTTGGAGCAATGGTGTAACAAAGCTACCGATACGTATGCTGGCTCTTCTTGGGATGAACTTCAACACATAAGACAAGCAGTAGGATTTCTGGTGTTACTCCAGAAATCCCAGAAAAGTTTGAATGAGATCACAGATGAATTGTGCCCGATTCTGAGCATTCCGCAAATATATCGCATAGGCACGATGTTCTGGGATGACAAATATGGAACTCAGGGATTATCTCCTGATATAATTGGAAAAATGAGAGTCCTACTGGCAGAAGACTCCATAAACATCCCAAACAACTCTTTCCTGCTTGATGTGGATTCAAGCATACCATTTTCAATGGAAGAAATATTCCGGTCGTTTGGCGAGGATGGCGGGGTTAACCTTTCCGACGTTGACCCGCCACCACTTATAAGACAAAGATCGGATTTCCATTTTCTAGTGCAGCAACTGACTGAATGA 4782 42.33 MPLSSCVKGPTLPAPPATTTMCDCARELKFHNREISKGTPVNIIVGSHVWVEDPEDAWIEGQVTEINGKNATILTTNEKTIVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAPFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKFKLGDPRTFHYLNQTNCYEVANVDDAREYLETRNAMDVVGISQEEQDAIFRVVASILHLGNINFMKGKEVDSSKVKDEKSNYHLQTAAELLMCDVKALEHSLCQRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASRCSFVANLFPPLPEESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTHLTRKEFIALRRATIHIQKLWRGQLARKLYEQMRREAASIRIQKHARAHADRKSYKKLLASAIVIQTGMRAMAARNEYRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLALQCLWRSKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQNALEEMQGQLDEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLEMLRNHNEELEGEVGELKKKIEEFEEKYAEVEKESKARLKEAEEAHLKSLQLQEAIERLESNLSSLESENQVLRQQALVAADNESLSEEVQALKSKIGSLEAENEVLRNRPVAVEHISVPAGALTESKTLDNGHVKEEENKSTKEPSTVPILVKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEAEKTNIFDRIIHTIRSSIESQENISDFAYWLSTTSTLLYLLQSSLKATNTSTVASHRNRASPATLFGRMAYGLRSSSVGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVKSRSIRGSSKNIHSNIVAKQQASSIHWQSIVNKLDQTLDIMSENHVPSMIMRKIFFQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTYAGSSWDELQHIRQAVGFLVLLQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDIIGKMRVLLAEDSINIPNNSFLLDVDSSIPFSMEEIFRSFGEDGGVNLSDVDPPPLIRQRSDFHFLVQQLTE 1593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3900280 3913958 + CaPI482276_09g003560.1 Cam09g0356 134685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0356 1593 Gene3D - 820 870 - -
Cam09g0356 1593 Gene3D - 769 819 - -
Cam09g0356 1593 CDD MyosinXI_CBD 1168 1555 IPR037975 GO:0007015(InterPro)
Cam09g0356 1593 ProSiteProfiles IQ motif profile. 770 797 - -
Cam09g0356 1593 PANTHER MYOSIN 48 1529 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cam09g0356 1593 Pfam Myosin N-terminal SH3-like domain 45 83 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 Gene3D - 475 659 - -
Cam09g0356 1593 Pfam DIL domain 1408 1511 IPR002710 -
Cam09g0356 1593 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 821 918 IPR027417 -
Cam09g0356 1593 ProSiteProfiles IQ motif profile. 889 918 - -
Cam09g0356 1593 Gene3D - 703 765 - -
Cam09g0356 1593 ProSiteProfiles IQ motif profile. 793 822 - -
Cam09g0356 1593 Gene3D Myosin VI head, motor domain, U50 subdomain 348 637 - -
Cam09g0356 1593 ProSiteProfiles IQ motif profile. 818 844 - -
Cam09g0356 1593 ProSiteProfiles Dilute domain profile. 1217 1532 IPR002710 -
Cam09g0356 1593 FunFam Myosin XI D 703 765 - -
Cam09g0356 1593 FunFam unconventional myosin-Va 869 916 - -
Cam09g0356 1593 FunFam unconventional myosin-Va 821 868 - -
Cam09g0356 1593 Pfam Myosin head (motor domain) 100 755 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 Coils Coil 1091 1118 - -
Cam09g0356 1593 FunFam Class V myosin 475 619 - -
Cam09g0356 1593 ProSiteProfiles IQ motif profile. 841 870 - -
Cam09g0356 1593 PRINTS Myosin heavy chain signature 518 546 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 PRINTS Myosin heavy chain signature 185 210 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 PRINTS Myosin heavy chain signature 128 147 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 PRINTS Myosin heavy chain signature 232 259 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 PRINTS Myosin heavy chain signature 465 493 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 44 93 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 Coils Coil 912 946 - -
Cam09g0356 1593 Gene3D Kinesin motor domain 101 698 IPR036961 -
Cam09g0356 1593 FunFam Myosin 2 348 463 - -
Cam09g0356 1593 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 821 IPR027417 -
Cam09g0356 1593 Coils Coil 1008 1084 - -
Cam09g0356 1593 FunFam Myosin heavy chain 288 343 - -
Cam09g0356 1593 Coils Coil 951 985 - -
Cam09g0356 1593 CDD MYSc_Myo11 112 755 IPR036018 -
Cam09g0356 1593 SMART DIL_2 1407 1514 IPR002710 -
Cam09g0356 1593 SMART MYSc_2a 92 768 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 FunFam unconventional myosin-Va 772 820 - -
Cam09g0356 1593 Gene3D - 288 346 - -
Cam09g0356 1593 ProSiteProfiles Myosin motor domain profile. 98 767 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cam09g0356 1593 SMART iq_5 792 814 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 SMART iq_5 888 910 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 SMART iq_5 865 887 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 SMART iq_5 817 839 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 SMART iq_5 840 862 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 SMART iq_5 769 791 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 Pfam IQ calmodulin-binding motif 820 839 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 Pfam IQ calmodulin-binding motif 794 813 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 Pfam IQ calmodulin-binding motif 891 910 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 Pfam IQ calmodulin-binding motif 843 862 IPR000048 GO:0005515(InterPro)
Cam09g0356 1593 Pfam IQ calmodulin-binding motif 773 790 IPR000048 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1548 Cam-Chr3:30414607 Cam09g0356 Cam-Chr9:3900280 0.00E+00 dispersed
Cam06g0094 Cam-Chr6:2836858 Cam09g0356 Cam-Chr9:3900280 0.00E+00 dispersed
Cam08g1433 Cam-Chr8:20616224 Cam09g0356 Cam-Chr9:3900280 0.00E+00 dispersed
Cam09g0356 Cam-Chr9:3900280 Cam09g0788 Cam-Chr9:8002973 9.40E-259 dispersed
Cam09g0356 Cam-Chr9:3900280 Cam05g0428 Cam-Chr5:3877070 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0356 K10357 - csv:101207221 2902.08