Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0397 ATGGCGAAGACTAGGGCTCATGAGCTATCGCGAGCGTTAGCAGGTGATACATGCACAATTCGGCTGACTGAAATTTTCGGGAGGGCGACCAAGTCTATTTTGGGCTTCTTTATCATGGTGGGTCTTTGCAATGGCGTGCATTACCTTTTGAGGCCATTTTCTCAACCTCGCATTACCTCTGATACGATCGTAGGTTTGGCTGTTGGCAACTTCATAAGGAAGGAACTTGATATATCAACGATTAAGACGCTGCGTTATATCGTCGACTTTGGTATGATATGCTATATGTTTGTGCTGGGATTGGAGGTGGATCCATATGTACTCTTCAAAGCACCTACACGTGATGCTAAGGTAGCTTATGCTGGAATGATTTCAACACTCATCTTAGCCTGTTCCATAATCCCATTTATTAGCTTTGCAAAGTCAAAAGAGATCAGTTTCATAATCTCCCTCTCAACTGTCCTCTCTAGCACTGCTTCTCCTGTACTAACCCGTTTGATTACCAGTCTTAAAATCGGTAGGTCAGATATAGGCCAGCTCGTCATTGCTGCCGGAATGCATTCTGATTTTATATCCACTCTCATGATCTGTATTGGTTATCTCTTTTGCAAATGCCAAGAGACACGCATCTCCCTTATAAAAGGTTTTCAATTAGGTATTCTATTATTGATCCAGTCAGTACTGACAGCGAAGGTTTCACCGGTATTCATGAACTGGGTAAATAATGAAAACCCCGAGGGTAAACCTATGAAAGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGTGGTTGCCCTACTGTATTTGGTTACAATCCGATTCTCAGTGCATTTTTAGCTGGAACATTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGCAATTGGAAAAATTAACTACCTGCTTACTACCGTTTTCTATCCCATCTTCTTCTTTTGGATGGGGGTTGAATCCAAGTTGAGTGACTTTGAACCTGGACAAATAATGACATGGATTAGGTTAATTCTGCTTTTTGCTATTGTAACCGTAGGAAAAGTTGTTGGTACTGTCATTGCTGGGGCAATTTTGGGGTTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCATATATACTTGGCTATTGCTGCAAAAACAGCTGGAAAGATAACTACATCTACGAGCTTGGTGATGGTAATTGTAATCTTCTTCACAGTCGTGCATGCTCCAAAAGTTGTAGCACATATAATCAAGAGGGCAAGGAAACGCACACCTACACATCGAATGGCTCTCCAATTGCTTGATCCATCAAGTGAGCTTAAGATCTTGTTATGTATACATGGACCTCAGAACACTGCAGCAGCCATTAACATCATGGAGATTTCTCGGGGGACAGCTAACCCTGGAGTTGTTGTATATGTCACAGACATGATTGAACTTACAGATGAAATAGCATCCACATTAGTTCAAGGTGAAGGAGTGGACACCGTGACTGTAACCCACACAGGAGTGACACAAATGAGAGACCAAGTTACTTCTGCAGTTCAGAGCTATGTAGATGAAAATGGAGAAGGGATTACTCTTAGGAGAATGTTAGCTCTCTCAACATTCAATTCTATGGCTCAGGACATTTGCATTTTGGCAGAGGAATTGATGGGAGCTCTTATCATACTGCCATTCCACAAGAGCCAGCGTGGAGATGGGTCGTTGAGTGAGGGCCAAGCAGCTTTCCGATATGTAAACCGCAAGGTTCTCAGGCATGCCCCCTGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGATCAGTGGAGAAAATTTCGAGGTCGTATGTATCTCAAAGTGTGGCAGTCATCTTCATTGGCGGTAAAGATGACCGAGAAGCATTAGCCTATGCCGGTCGAGTAGCAAGGCATCCCGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGATGCAGAAAATGCTGCAAGAAGAGCTGGGACTTACAGGATAAGTGTTGCTGAGCAGGAAGAGGAAATGAGACAGGACGATGAATGCTTTGCCTATTTTTACGAAAGGCATGTGGCTGGTGGGCACGTTGCGTACGTTGAAAAACACCTGGCCAGTTCCTCCGAGACGTATTCTACTTTGAAATCACTGGAAGGGCAATACGCCCTCATAATCGTAGGTCGAGGTGGGAAGGTCAACTCGGTGTTAACTTTTGGGATGAATGACTGGCAACAGTGTCCAGAACTGGGTCCTATAGGGGACATTCTTTCCGGGTCTGAATTCTCTGTTAGGACCTCAGTTTTGATCATCCATCAACACAATCTAAAAGGAGAACTAGATGGACTTGATGATGACTTTTCAATTATGTAG 2373 43.87 MAKTRAHELSRALAGDTCTIRLTEIFGRATKSILGFFIMVGLCNGVHYLLRPFSQPRITSDTIVGLAVGNFIRKELDISTIKTLRYIVDFGMICYMFVLGLEVDPYVLFKAPTRDAKVAYAGMISTLILACSIIPFISFAKSKEISFIISLSTVLSSTASPVLTRLITSLKIGRSDIGQLVIAAGMHSDFISTLMICIGYLFCKCQETRISLIKGFQLGILLLIQSVLTAKVSPVFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCGCPTVFGYNPILSAFLAGTFLPREGRVSRWAIGKINYLLTTVFYPIFFFWMGVESKLSDFEPGQIMTWIRLILLFAIVTVGKVVGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAIAAKTAGKITTSTSLVMVIVIFFTVVHAPKVVAHIIKRARKRTPTHRMALQLLDPSSELKILLCIHGPQNTAAAINIMEISRGTANPGVVVYVTDMIELTDEIASTLVQGEGVDTVTVTHTGVTQMRDQVTSAVQSYVDENGEGITLRRMLALSTFNSMAQDICILAEELMGALIILPFHKSQRGDGSLSEGQAAFRYVNRKVLRHAPCSVGILVDRGLGSVEKISRSYVSQSVAVIFIGGKDDREALAYAGRVARHPGVKLSVIRFLVDADAENAARRAGTYRISVAEQEEEMRQDDECFAYFYERHVAGGHVAYVEKHLASSSETYSTLKSLEGQYALIIVGRGGKVNSVLTFGMNDWQQCPELGPIGDILSGSEFSVRTSVLIIHQHNLKGELDGLDDDFSIM 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4345544 4349286 + CaPI482276_09g003970.1 Cam09g0397 134726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0397 790 PANTHER CATION/H + ANTIPORTER 37 775 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cam09g0397 790 Pfam Sodium/hydrogen exchanger family 49 419 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cam09g0397 790 Gene3D - 443 743 - -
Cam09g0397 790 Gene3D - 29 429 IPR038770 -
Cam09g0397 790 FunFam Cation/H(+) antiporter 28 30 429 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0397 Cam-Chr9:4345544 Cam09g1249 Cam-Chr9:14342956 2.40E-85 dispersed
Cam09g0397 Cam-Chr9:4345544 Cam06g0714 Cam-Chr6:9648894 8.20E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0397 K26731 - csv:101211645 1475.3