Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0410 ATGTGGAGATCATGTTGGGAAGACCGTCGAGGACCATGCTATGAGTACGAGAGAAAAGATGGCAATCAGTCTTGTCCTCAATGCAAAAGCAGATACAAGAGGCACAAAGGAAGTCCTGCTGTTCTTGGTGATGAAGAGGCTGCTGAGCTTGATGACGATGATGATGCGAATGATTTAAATTACATTTCTGAAAGCCAAAAAGAGAAGCAGAAGATTGTGGAGCGAATGATGAGCTGGCAGGTGTCATATGGGCAAGCACAAGATCTCCCACCTCCGAATTATGACAAAGAAGTTTCTTTAAATCACATTCCATTGCTCACCAATGGGCAGGAGGTTTCTGGAGAACTTTCAGCTGCATCACCCGAGCATCATTTGATGGCATCTCCTGGACATCCTCGTGGGAAGCCAATATATTCTCTTCCTTATGCAGCTGATATTAACCAATCACCTAACGTGCGAGGTGTGGACCCTACAAAAGAGTATAATTCGTCGGGGCTAGGCAATGTAGCTTGGAAGGAGAGAGTTGATGGCTGGAAGATGAAACAGGAGAAGAATGCTGGACCAATGAGCATAGCCCATGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCTGCACAGATGTGCTTGTTGACGACTCCTTACTAAATGATGAAGCTCGCCAGCCTCTTTCACGAAAGGTTTCTATTCCATCATCTAGGATAAACCCTTACCGAATGGTGATTGTTCTTCGGCTTGTAATTCTTTGTTTTTTCTTGCACTACCGAATCACAAATCCAGTACGCAATGCATATGCTCTATGGCTGATATCTGTTATATGTGAGATTTGGTTTGCAATATCCTGGATATTAGATCAGTTCCCGAAGTGGCTTCCTGTAAACCGTGAGACATATCTAGATCGACTTGCATTAAGATATGATAGGGAAGGGGAACCATCACAGCTTGCTGCTGTTGACATTTTTGTGAGTACTGTCGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACTGTACTATCTATTCTTGCTGTTGACTACCCGGTTGACAAGGTCTCGTGCTATGTTTCTGATGATGGAGCTGCCATGTTGACATTTGAAGCATTATCCGAAACATCAGAGTTTGCAAGGTCATGGGTGCCTTTCTGCAAGAAACACAGCATTGAGCCTCGGGCTCCAGAATGGTACTTCGCTCAGAAAATTGATTACTTGAAGGATAAAGTCGATCCATCATTTGTCAAAGATCGAAGAGCAATGAAGAGAGAATACGAGGAATTTAAGGTCCGCATCAATGGCTTGGTATCAAAGGCACAAAAGATTCCCGAAGAAGGATGGGTCATGCAAGATGGAACTCCGTGGCCTGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGCCAAAACGGTGGACTGGATTCCGATGGTAATGAGTTGCCTCGTTTAGTCTATGTATCTCGTGAAAAACGTCCAGGATTCCAACATCATAAGAAAGCTGGTGCAATGAATGCTCTTGTTCGAGTGTCTGCTGTTCTTACCAATGGCCCATTCTTGTTGAATCTTGACTGTGATCACTACATAAACAACAGCAAGGCATTAAGGGAAGCAATGTGTTTCATGATGGATCCAAACCTTGGCAAATACGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATAAGAACGATCGATATGCCAACCGTAATACCGTGTTCTTTGATATAAATTTAAGAGGTTTAGATGGCCTTCAAGGTCCAGTTTATGTGGGTACTGGATGTGTCTTCAACAGAACTGCACTGTATGGTTATGAACCTCCTCACAAACCAAAGCATCGGAAAACAGGATTTCTGTCTTCACTCTGTGGTGGATCTCGAAAGAAGAATTCAAAATCAAGCAAAAAAAGTCCAGACAAGAAGAAATCAAGCAGGCATGTGGACCCGACAGTGCCAATTTTCAATCTCGACGACATTGAAGAAGTGGTTGAAGGTGCTGGATTTGATGATGAGAAGTCCTTGTTAATGTCACAAATGACCCTGGAGCAAAGGTTTGGCCAGTCCTCTGTTTTTGTTGCCTCAACCCTTATGGAAAATGGCGGCGTTCCTCAATCGGCAACGCCCGAGTCTCTTCTAAAGGAGGCTATTCATGTTATCAGCTGTGGATATGAAGACAAAACAGACTGGGGATCCGAGATTGGATGGATTTATGGCTCTGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTATTGTATGCCACAACGTCCTGCTTTTAAAGGGTCTGCGCCTATTAATCTTTCAGATCGATTAAACCAAGTGCTTCGATGGGCCCTCGGTTCGGTGGAGATTCTTCTGAGTAGGCATTGCCCTATCTGGTATGGCTATGGTGGAAGGCTCAAATGGCTCGAAAGGTTCGCATATGTGAACACTACGATCTATCCGATCACTGCAGTTCCTCTTCTCATGTATTGTACCTTGCCAGCTGTGTGTCTGCTGACGAACAAGTTCATCATTCCCCAGATAAGTAACGTTGCAAGTATATGGTTTATAGCCCTCTTTCTCTCCATCTTTGCGACGGGCATTCTCGAGATGAGATGGAGCGGGGTTGGGATCGACGAGTGGTGGAGAAACGAACAATTTTGGGTCATTGGAGGTGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTCTGCTCAAGGTTCTTGCCGGTATCGACACCAACTTTACGGTCACATCCAAGGCGTCTGACGAAGACGGGGACTATGCTGAGCTTTACATGTTCAAATGGACGACTCTTCTCATCCCACCAACTACACTCCTCATCGTAAACTTGGTAGGGGTCGTAGCGGGAATATCTTACGCAATCAACAGTGGATACCAATCATGGGGACCACTGTTTGGCAAGCTATTTTTCGCTTTCTGGGTGATCATTCATCTCTATCCATTCTTGAAAGGTTTGATGGGTCGCCAAAATAGAACACCCACCATTGTCGTCGTGTGGTCGATTCTGCTTGCTTCCATCTTCTCGTTGTTATGGGTGAGGATCGATCCGTTCACTACAACAGTCATAGGGCCCGACGTCGAGGAGTGTGGAATCAACTGCTAG 3141 45.05 MWRSCWEDRRGPCYEYERKDGNQSCPQCKSRYKRHKGSPAVLGDEEAAELDDDDDANDLNYISESQKEKQKIVERMMSWQVSYGQAQDLPPPNYDKEVSLNHIPLLTNGQEVSGELSAASPEHHLMASPGHPRGKPIYSLPYAADINQSPNVRGVDPTKEYNSSGLGNVAWKERVDGWKMKQEKNAGPMSIAHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCFFLHYRITNPVRNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARSWVPFCKKHSIEPRAPEWYFAQKIDYLKDKVDPSFVKDRRAMKREYEEFKVRINGLVSKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPHKPKHRKTGFLSSLCGGSRKKNSKSSKKSPDKKKSSRHVDPTVPIFNLDDIEEVVEGAGFDDEKSLLMSQMTLEQRFGQSSVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPQRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAVPLLMYCTLPAVCLLTNKFIIPQISNVASIWFIALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDYAELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTTVIGPDVEECGINC 1046
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4447227 4452829 + CaPI482276_09g004100.1 Cam09g0410 134739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0410 1046 MobiDBLite consensus disorder prediction 18 56 - -
Cam09g0410 1046 FunFam Cellulose synthase 435 609 - -
Cam09g0410 1046 Pfam Zinc-binding RING-finger 12 47 IPR027934 -
Cam09g0410 1046 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 226 1015 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Cam09g0410 1046 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 460 609 IPR029044 -
Cam09g0410 1046 Pfam Cellulose synthase 318 1038 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Cam09g0410 1046 MobiDBLite consensus disorder prediction 611 652 - -
Cam09g0410 1046 SUPERFAMILY RING/U-box 12 53 - -
Cam09g0410 1046 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 57 IPR013083 -
Cam09g0410 1046 SUPERFAMILY Nucleotide-diphospho-sugar transferases 332 868 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0378 Cam-Chr4:14418618 Cam09g0410 Cam-Chr9:4447227 0.00E+00 dispersed
Cam05g1861 Cam-Chr5:27568443 Cam09g0410 Cam-Chr9:4447227 0.00E+00 dispersed
Cam09g0410 Cam-Chr9:4447227 Cam11g1150 Cam-Chr11:22586771 0.00E+00 dispersed
Cam09g0410 Cam-Chr9:4447227 Cam02g0928 Cam-Chr2:13097730 1.10E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0410 K10999 - csv:101206590 2042.31