Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g0410 | ATGTGGAGATCATGTTGGGAAGACCGTCGAGGACCATGCTATGAGTACGAGAGAAAAGATGGCAATCAGTCTTGTCCTCAATGCAAAAGCAGATACAAGAGGCACAAAGGAAGTCCTGCTGTTCTTGGTGATGAAGAGGCTGCTGAGCTTGATGACGATGATGATGCGAATGATTTAAATTACATTTCTGAAAGCCAAAAAGAGAAGCAGAAGATTGTGGAGCGAATGATGAGCTGGCAGGTGTCATATGGGCAAGCACAAGATCTCCCACCTCCGAATTATGACAAAGAAGTTTCTTTAAATCACATTCCATTGCTCACCAATGGGCAGGAGGTTTCTGGAGAACTTTCAGCTGCATCACCCGAGCATCATTTGATGGCATCTCCTGGACATCCTCGTGGGAAGCCAATATATTCTCTTCCTTATGCAGCTGATATTAACCAATCACCTAACGTGCGAGGTGTGGACCCTACAAAAGAGTATAATTCGTCGGGGCTAGGCAATGTAGCTTGGAAGGAGAGAGTTGATGGCTGGAAGATGAAACAGGAGAAGAATGCTGGACCAATGAGCATAGCCCATGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCTGCACAGATGTGCTTGTTGACGACTCCTTACTAAATGATGAAGCTCGCCAGCCTCTTTCACGAAAGGTTTCTATTCCATCATCTAGGATAAACCCTTACCGAATGGTGATTGTTCTTCGGCTTGTAATTCTTTGTTTTTTCTTGCACTACCGAATCACAAATCCAGTACGCAATGCATATGCTCTATGGCTGATATCTGTTATATGTGAGATTTGGTTTGCAATATCCTGGATATTAGATCAGTTCCCGAAGTGGCTTCCTGTAAACCGTGAGACATATCTAGATCGACTTGCATTAAGATATGATAGGGAAGGGGAACCATCACAGCTTGCTGCTGTTGACATTTTTGTGAGTACTGTCGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACTGTACTATCTATTCTTGCTGTTGACTACCCGGTTGACAAGGTCTCGTGCTATGTTTCTGATGATGGAGCTGCCATGTTGACATTTGAAGCATTATCCGAAACATCAGAGTTTGCAAGGTCATGGGTGCCTTTCTGCAAGAAACACAGCATTGAGCCTCGGGCTCCAGAATGGTACTTCGCTCAGAAAATTGATTACTTGAAGGATAAAGTCGATCCATCATTTGTCAAAGATCGAAGAGCAATGAAGAGAGAATACGAGGAATTTAAGGTCCGCATCAATGGCTTGGTATCAAAGGCACAAAAGATTCCCGAAGAAGGATGGGTCATGCAAGATGGAACTCCGTGGCCTGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGCCAAAACGGTGGACTGGATTCCGATGGTAATGAGTTGCCTCGTTTAGTCTATGTATCTCGTGAAAAACGTCCAGGATTCCAACATCATAAGAAAGCTGGTGCAATGAATGCTCTTGTTCGAGTGTCTGCTGTTCTTACCAATGGCCCATTCTTGTTGAATCTTGACTGTGATCACTACATAAACAACAGCAAGGCATTAAGGGAAGCAATGTGTTTCATGATGGATCCAAACCTTGGCAAATACGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATAAGAACGATCGATATGCCAACCGTAATACCGTGTTCTTTGATATAAATTTAAGAGGTTTAGATGGCCTTCAAGGTCCAGTTTATGTGGGTACTGGATGTGTCTTCAACAGAACTGCACTGTATGGTTATGAACCTCCTCACAAACCAAAGCATCGGAAAACAGGATTTCTGTCTTCACTCTGTGGTGGATCTCGAAAGAAGAATTCAAAATCAAGCAAAAAAAGTCCAGACAAGAAGAAATCAAGCAGGCATGTGGACCCGACAGTGCCAATTTTCAATCTCGACGACATTGAAGAAGTGGTTGAAGGTGCTGGATTTGATGATGAGAAGTCCTTGTTAATGTCACAAATGACCCTGGAGCAAAGGTTTGGCCAGTCCTCTGTTTTTGTTGCCTCAACCCTTATGGAAAATGGCGGCGTTCCTCAATCGGCAACGCCCGAGTCTCTTCTAAAGGAGGCTATTCATGTTATCAGCTGTGGATATGAAGACAAAACAGACTGGGGATCCGAGATTGGATGGATTTATGGCTCTGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTATTGTATGCCACAACGTCCTGCTTTTAAAGGGTCTGCGCCTATTAATCTTTCAGATCGATTAAACCAAGTGCTTCGATGGGCCCTCGGTTCGGTGGAGATTCTTCTGAGTAGGCATTGCCCTATCTGGTATGGCTATGGTGGAAGGCTCAAATGGCTCGAAAGGTTCGCATATGTGAACACTACGATCTATCCGATCACTGCAGTTCCTCTTCTCATGTATTGTACCTTGCCAGCTGTGTGTCTGCTGACGAACAAGTTCATCATTCCCCAGATAAGTAACGTTGCAAGTATATGGTTTATAGCCCTCTTTCTCTCCATCTTTGCGACGGGCATTCTCGAGATGAGATGGAGCGGGGTTGGGATCGACGAGTGGTGGAGAAACGAACAATTTTGGGTCATTGGAGGTGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTCTGCTCAAGGTTCTTGCCGGTATCGACACCAACTTTACGGTCACATCCAAGGCGTCTGACGAAGACGGGGACTATGCTGAGCTTTACATGTTCAAATGGACGACTCTTCTCATCCCACCAACTACACTCCTCATCGTAAACTTGGTAGGGGTCGTAGCGGGAATATCTTACGCAATCAACAGTGGATACCAATCATGGGGACCACTGTTTGGCAAGCTATTTTTCGCTTTCTGGGTGATCATTCATCTCTATCCATTCTTGAAAGGTTTGATGGGTCGCCAAAATAGAACACCCACCATTGTCGTCGTGTGGTCGATTCTGCTTGCTTCCATCTTCTCGTTGTTATGGGTGAGGATCGATCCGTTCACTACAACAGTCATAGGGCCCGACGTCGAGGAGTGTGGAATCAACTGCTAG | 3141 | 45.05 | MWRSCWEDRRGPCYEYERKDGNQSCPQCKSRYKRHKGSPAVLGDEEAAELDDDDDANDLNYISESQKEKQKIVERMMSWQVSYGQAQDLPPPNYDKEVSLNHIPLLTNGQEVSGELSAASPEHHLMASPGHPRGKPIYSLPYAADINQSPNVRGVDPTKEYNSSGLGNVAWKERVDGWKMKQEKNAGPMSIAHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCFFLHYRITNPVRNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARSWVPFCKKHSIEPRAPEWYFAQKIDYLKDKVDPSFVKDRRAMKREYEEFKVRINGLVSKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPHKPKHRKTGFLSSLCGGSRKKNSKSSKKSPDKKKSSRHVDPTVPIFNLDDIEEVVEGAGFDDEKSLLMSQMTLEQRFGQSSVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPQRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAVPLLMYCTLPAVCLLTNKFIIPQISNVASIWFIALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDYAELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTTVIGPDVEECGINC | 1046 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4447227 | 4452829 | + | CaPI482276_09g004100.1 | Cam09g0410 | 134739 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g0410 | 1046 | MobiDBLite | consensus disorder prediction | 18 | 56 | - | - | |
Cam09g0410 | 1046 | FunFam | Cellulose synthase | 435 | 609 | - | - | |
Cam09g0410 | 1046 | Pfam | Zinc-binding RING-finger | 12 | 47 | IPR027934 | - | |
Cam09g0410 | 1046 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 226 | 1015 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Cam09g0410 | 1046 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 460 | 609 | IPR029044 | - | |
Cam09g0410 | 1046 | Pfam | Cellulose synthase | 318 | 1038 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Cam09g0410 | 1046 | MobiDBLite | consensus disorder prediction | 611 | 652 | - | - | |
Cam09g0410 | 1046 | SUPERFAMILY | RING/U-box | 12 | 53 | - | - | |
Cam09g0410 | 1046 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 9 | 57 | IPR013083 | - | |
Cam09g0410 | 1046 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 332 | 868 | IPR029044 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam04g0378 | Cam-Chr4:14418618 | Cam09g0410 | Cam-Chr9:4447227 | 0.00E+00 | dispersed | |
Cam05g1861 | Cam-Chr5:27568443 | Cam09g0410 | Cam-Chr9:4447227 | 0.00E+00 | dispersed | |
Cam09g0410 | Cam-Chr9:4447227 | Cam11g1150 | Cam-Chr11:22586771 | 0.00E+00 | dispersed | |
Cam09g0410 | Cam-Chr9:4447227 | Cam02g0928 | Cam-Chr2:13097730 | 1.10E-117 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g0410 | K10999 | - | csv:101206590 | 2042.31 |