Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam09g0446 | ATGTTTTCCCATGCATTTCCATTCCTTCATCACAAACCTATGATGGATTCCGGCAACCTCTCCTCCTCCTCCCCCGCCGCAGCCTTGCCTCCTCCAATTTCTGTTGGAAACGGGCTCCGGTTGCTCCTCGATGTCCAAATCTTGGAGATCTCTTTCGCTCTTTTTGTGTTCTTAGTCATCCATGTCATTAGACAGAAGAGACGATATGGCTTGCCTATATGGCCAATCGTTGGAATGTTACCGGCTTTGATTACGGCAGCACGTGGGAATCTCTACGACTGGATTACTGACCTCCTCCGCCATCACAAGGGCACGTTTCAATTTCGAGGCCCCTGGCTTACTAGTCTCAATTGTGTCGTCACTGCTGATCCTCGAAACTTGGAGCACCTTCTCAAGACCAAATTTTCCTCCTACCCAAAAGGGCCATTCTTTCGTGACACGGTGAGAGACCTACTCGGTGACGGAATATTCGGTGCCGACGATGAGACGTGGCAACGTCAAAGGAAGGTGGCGAGCATTGAGTTTCACTCGGCGAGGTTCCGACAAATGACGGTGGAGTCGTTGGTGGAGCTCGTCCACTCGAGGTTAGAAGCGGTGTTGGAGGATTTCGCGGGACGGTCGGCAACGGTGGACCTGCAGGATGTTCTTCTGAGGTTAACGTTTGACAATGTGTGTATGATTGCCTTTGGGGTGGATCCTGGCTGTTTGCGCGGCGGCTTACCGGAGATTCCATTTGCTAAGGCCTTTGAGGATGCCACTGAAGTTACTGTTATACGCTTCATCACACCTACTTTCGTATGGAAAGCCATGAGGTACCTGAACTTGGGTATGGAAAAGAAACTGAAGCAATCGATCAAAGCCGTCGACGAATTTGCAGATAATGTGATTCAAACACGGAAGAGAGAGCTCTCTACGGCGGCGCAACCGCAAGCCGATAACCAAAGATCTGACCTATTAACCGTATTCATGAAGCTAAGAGACGAGCAAGGGCGGCCGTTCTCCGACAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTTGCCGGAAGAGACACATCTTCCGTAGCATTGAGTTGGTTTTTCTGGTTGCTCGATCAAAATCCCCATGTGGAAGACAAAATTCTGGCAGAAATTGGCAGAATCGTCGGCGAACGAGAAGAAGCCAAAACCAGAGAGCTTCGATTCGATTTGTTAGTGTTCAAACCAGAGGAAATCAAGAAAATGGAGTATTTGCACGCCGCCATTTCCGAAGCCCTAAGATTGTATCCATCAGTTCCAGTCGATCACAAAGAGGTCGTGGAGGACGATGTATTCCCAGACGGAACGATTCTGAAGAAAGGAACGAAAATCATCTACGCAATATACGCAATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAGAGACGGTCGGTTCATGAGCGAATCGGCGTATCGATTCACAGCCTTCAACGGCGGCCCTCGGCTGTGTCTTGGAAAGGATTTTGCGTACTATCAAATGAAATACGTCGCCGCTTCGATCATGAGCCGGTACCGGGTGGCGGTGGTGACGGGCCATTCGGTGGAGCCGAAGCTTGCCCTAACTTTCTACATGAAAAACGGCCTGAAAGTCAATTTGATTAAACGAGAAGAGGGGCAGATTCGGAAATACATGAAGTTAAATTGA | 1695 | 48.97 | MFSHAFPFLHHKPMMDSGNLSSSSPAAALPPPISVGNGLRLLLDVQILEISFALFVFLVIHVIRQKRRYGLPIWPIVGMLPALITAARGNLYDWITDLLRHHKGTFQFRGPWLTSLNCVVTADPRNLEHLLKTKFSSYPKGPFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLEAVLEDFAGRSATVDLQDVLLRLTFDNVCMIAFGVDPGCLRGGLPEIPFAKAFEDATEVTVIRFITPTFVWKAMRYLNLGMEKKLKQSIKAVDEFADNVIQTRKRELSTAAQPQADNQRSDLLTVFMKLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPHVEDKILAEIGRIVGEREEAKTRELRFDLLVFKPEEIKKMEYLHAAISEALRLYPSVPVDHKEVVEDDVFPDGTILKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMRDGRFMSESAYRFTAFNGGPRLCLGKDFAYYQMKYVAASIMSRYRVAVVTGHSVEPKLALTFYMKNGLKVNLIKREEGQIRKYMKLN | 564 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 4714560 | 4716875 | + | CaPI482276_09g004460.1 | Cam09g0446 | 134775 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam09g0446 | 564 | PRINTS | E-class P450 group I signature | 337 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | E-class P450 group I signature | 412 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | E-class P450 group I signature | 500 | 523 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | E-class P450 group I signature | 357 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | E-class P450 group I signature | 490 | 500 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | P450 superfamily signature | 500 | 511 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | P450 superfamily signature | 348 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | P450 superfamily signature | 491 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PRINTS | P450 superfamily signature | 413 | 424 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | PANTHER | CYTOCHROME P450 | 61 | 545 | - | - | |
| Cam09g0446 | 564 | CDD | CYP86A | 106 | 545 | - | - | |
| Cam09g0446 | 564 | Gene3D | Cytochrome P450 | 69 | 562 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | FunFam | Cytochrome P450 | 62 | 555 | - | - | |
| Cam09g0446 | 564 | Pfam | Cytochrome P450 | 72 | 537 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | SUPERFAMILY | Cytochrome P450 | 70 | 552 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam09g0446 | 564 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 493 | 502 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g1646 | Cam-Chr1:30057466 | Cam09g0446 | Cam-Chr9:4714560 | 4.30E-104 | dispersed | |
| Cam01g1647 | Cam-Chr1:30072272 | Cam09g0446 | Cam-Chr9:4714560 | 9.10E-99 | dispersed | |
| Cam03g0085 | Cam-Chr3:1822214 | Cam09g0446 | Cam-Chr9:4714560 | 7.10E-123 | dispersed | |
| Cam09g0446 | Cam-Chr9:4714560 | Cam10g1614 | Cam-Chr10:29937769 | 2.30E-103 | dispersed | |
| Cam10g1476 | Cam-Chr10:28467277 | Cam09g0446 | Cam-Chr9:4714560 | 5.20E-209 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam09g0446 | K15402 | - | csv:101212202 | 1035.4 |