Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0458 ATGCGTATTACAAAGGAAGTAGGAAGCTTTGAGGACTTGTTTCCGTTCTACGAAGTTGATCGGAACATTGAGGACTTGTTTCCGTCGAATTTGATATCTGATCGACGTTGGCGCATCCATGGTATCCAGAAGGCTGCTGATAACAGCAGCATGTACCAAGTAAAAGCTTCAGCAGGAACTGATGAAGGCTATCACAAACGGCAAACTGCACCTAAAAGTCCTCCAATAGTGAAAATGCGGCCCATTGAAGTCCCTGCCATATCATTTGAGGAACTGAAGGAGGTTACGAAAAATTTCGATGCTGACTGTTTGATTGGAGAGGGTTCCTACGGTAGAGTATACTATGGGGTATTTACAAGTGGGCAGACTGTGGGAATCAAAAAGTTGGATGCCAGCAAACAATCGGATGATGAATTCTTATCCCAGGTCTCCATGGTTTCAAGACTAAAGCACAATAATTTTCTAAACTTGATTGGGTACTGTGTTGATGGCAATTCTCGAATTCTTGCATATGAGTATGCTTCAAATGGATCTCTTCACGACATTTTACACGGGAGGAAAGGAGTCAAAGGAGCACAACCCGGCCCTGTTCTTTCCTGGGCACAGAGAGTAAAAATTGCTGTAGGTGCTGCAAAGGGTTTGGAGTATTTGCATGAAAAGGTCGATCCTCATATCATCCATCGGGACATAAAATCCAGCAACGTACTAATATTTGATGATGATTTGGCAAAAATTGCTGACTTTGATTTGTCAAACCAAGCCCCTGATATGGCTGCACGGCTTCATTCCACCCGTGTTCTTGGAACCTTTGGCTATCATGCTCCTGAATACGCAATGACTGGACAATTGAATGCCAAGAGTGATGTGTACAGCTTTGGTGTTGTCCTGCTTGAACTTTTGACAGGAAGAAAGCCAGTTGATCATACATTGCCTCGAGGACAGCAAAGCCTCGTGACATGGGCCACGCCCAAACTTTGCGAGGATAAAGTTAAGCAATGCGTTGATGCAAAACTAGGAGATGAGTACCCTCCAAAGTCAGTTGCAAAGTTTGCAGCGGTTGCTGCATTGTGCGTTCAATATGAAGCAGATTTCAGACCAAACATGAGTATTGTGGTCAAAGCCCTGCAGCCTCTGTTAAATGTCCGACCTGGTCCTGGCGGTGAAGCACCAACTCTTTAA 1179 44.44 MRITKEVGSFEDLFPFYEVDRNIEDLFPSNLISDRRWRIHGIQKAADNSSMYQVKASAGTDEGYHKRQTAPKSPPIVKMRPIEVPAISFEELKEVTKNFDADCLIGEGSYGRVYYGVFTSGQTVGIKKLDASKQSDDEFLSQVSMVSRLKHNNFLNLIGYCVDGNSRILAYEYASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKVDPHIIHRDIKSSNVLIFDDDLAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLCEDKVKQCVDAKLGDEYPPKSVAKFAAVAALCVQYEADFRPNMSIVVKALQPLLNVRPGPGGEAPTL 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4830726 4835668 - CaPI482276_09g004580.1 Cam09g0458 134787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0458 392 CDD STKc_IRAK 105 378 - -
Cam09g0458 392 Pfam Protein tyrosine and serine/threonine kinase 104 375 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0458 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0458 392 Gene3D Transferase(Phosphotransferase) domain 1 174 382 - -
Cam09g0458 392 Gene3D Phosphorylase Kinase; domain 1 60 173 - -
Cam09g0458 392 SUPERFAMILY Protein kinase-like (PK-like) 74 375 IPR011009 -
Cam09g0458 392 ProSiteProfiles Protein kinase domain profile. 99 379 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0458 392 FunFam pto-interacting protein 1 175 386 - -
Cam09g0458 392 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 57 380 IPR052101 -
Cam09g0458 392 SMART serkin_6 99 379 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0458 Cam-Chr9:4830726 Cam10g1128 Cam-Chr10:24350236 1.10E-75 dispersed
Cam07g1607 Cam-Chr7:30728807 Cam09g0458 Cam-Chr9:4830726 6.10E-138 transposed
Cam08g0876 Cam-Chr8:12847818 Cam09g0458 Cam-Chr9:4830726 2.60E-136 transposed
Cam10g1730 Cam-Chr10:31337629 Cam09g0458 Cam-Chr9:4830726 2.70E-132 transposed
Cam10g1496 Cam-Chr10:28680809 Cam09g0458 Cam-Chr9:4830726 7.80E-164 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85422 PF07714 PK_Tyr_Ser-Thr 1.80E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0458 K13436 - csv:101215263 669.463