Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0602 ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACTGCCACAGCCAGAGTTCTCGCTTGTCTTTATGAGAAAGATCTCCATTACGAGTTTGTTCTTCTGGATATGAAAAATAACGAGCACAAGAAACACCCCTTTCTCTCCATTAACCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACCATTTTCGAATCAAGGGCCATTACTCAATACTTGGCCAACGCCTACGCCAGCAAGGGAACCCAATTGATCTCCAACGACCCGAAGAAAGCGGCGATCATATCAACGTGGATTGAAGTGGAGGGCCACCATTACGACCCACCGGCGGTTGCTCTGTCGTTTGAGCATCTAGTCAAGCCGCTGTTTGGACTCGGTGAAACTGATCCCGCAGCGGTAGCGGAGAACGAAGCCAAGCTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTAGCAGAAACAAGTTCTTGGCTGGGGATGAGTTCAGTTTGGCGGATCTGCATCACATACCCAATGTGAGCTACTTGCTCATGACGCCGTCAAAGAAGCTGTTCGAGTCACGGCCACGTGTCAACGCTTGGGTGGCCAAGATCACTGCAAGGCCTTCGTGGGCTAAGGTTGTTGCCTTGCGCAACCAGAGTTAA 651 50.54 MASIKVHGSPISTATARVLACLYEKDLHYEFVLLDMKNNEHKKHPFLSINPFGQVPGFQDGDLTIFESRAITQYLANAYASKGTQLISNDPKKAAIISTWIEVEGHHYDPPAVALSFEHLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSRNKFLAGDEFSLADLHHIPNVSYLLMTPSKKLFESRPRVNAWVAKITARPSWAKVVALRNQS 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5928962 5930457 - CaPI482276_09g006020.1 Cam09g0602 134931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0602 216 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Cam09g0602 216 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Cam09g0602 216 SFLD Main.5: Phi-like 1 212 - -
Cam09g0602 216 FunFam Glutathione S-transferase F2 88 210 - -
Cam09g0602 216 CDD GST_C_Phi 92 210 IPR034347 -
Cam09g0602 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 215 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cam09g0602 216 SFLD Main (cytGST) 1 212 - -
Cam09g0602 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Cam09g0602 216 CDD GST_N_Phi 4 76 - -
Cam09g0602 216 Gene3D Glutaredoxin 1 87 - -
Cam09g0602 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cam09g0602 216 SUPERFAMILY GST C-terminal domain-like 74 212 IPR036282 -
Cam09g0602 216 Gene3D - 90 214 - -
Cam09g0602 216 Pfam Glutathione S-transferase, C-terminal domain 129 204 IPR004046 -
Cam09g0602 216 FunFam Glutathione S-transferase F2 3 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1867 Cam-Chr8:24700163 Cam09g0602 Cam-Chr9:5928962 8.40E-49 dispersed
Cam09g0600 Cam-Chr9:5914759 Cam09g0602 Cam-Chr9:5928962 4.30E-82 dispersed
Cam09g0601 Cam-Chr9:5927043 Cam09g0602 Cam-Chr9:5928962 1.10E-77 tandem
Cam09g0602 Cam-Chr9:5928962 Cam09g0603 Cam-Chr9:5932415 5.70E-50 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0602 K00799 - csv:101212771 410.223