Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0603 ATGGCGGTGAAGGTGTACGGATTGGCAATCTCAACATGCACATCTACCGTCATTATTTGCCTTAATGAAAAGCAACTTGATTTCCAACTTCTCCATGTTGACCTTTTCAATGGTGAACACAAGCAACCTCCATTTTTGGCCATCAATCCCTTTGGCCAGATTCCAGCCCTAGAAGATGGTGATCTCACCTTATTTGAATCAAGAGCAATCACATCCTACATTGCAAACAAGCACAAGGAAACAGGGCCAGATCTCCTATTGCATCACCAAAGCACGAAAGAAGGAGCCATTGTGAAGCAATGGATAGAGGTAGAGTCTCACCATTACAACCCTGCAATAACTCCCATCATCCATGAGTTCTTCACTGCTCACCTTCGAGGCCAGGAGCCCGACCAGCGCCTCATCGACCAGAACTTGGAGCGCCTAGGCGCCGTTCTGGACGTGTATGAGCAGCGCCTAGGGTCCACCAAGTACCTGGGCGGGCCGTGGTACACCTTGGCCGATCTCCACCACCTCCCTTGCACGTTCTACTTCATGAAGACGCCATGGGCCTCAATGGTTAAGGATCGGCCGAATGTGAAGGCTTGGTGGGATGATATTTCATCCCGCCCCGCCTTCCTTAAGGTTATTGAGGGGATGAGTACTTTTGACTTTGGTGGCGATGACAAGAAATGA 675 49.78 MAVKVYGLAISTCTSTVIICLNEKQLDFQLLHVDLFNGEHKQPPFLAINPFGQIPALEDGDLTLFESRAITSYIANKHKETGPDLLLHHQSTKEGAIVKQWIEVESHHYNPAITPIIHEFFTAHLRGQEPDQRLIDQNLERLGAVLDVYEQRLGSTKYLGGPWYTLADLHHLPCTFYFMKTPWASMVKDRPNVKAWWDDISSRPAFLKVIEGMSTFDFGGDDKK 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5932415 5934553 - CaPI482276_09g006030.1 Cam09g0603 134932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0603 224 Pfam Glutathione S-transferase, C-terminal domain 116 204 IPR004046 -
Cam09g0603 224 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 213 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cam09g0603 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 224 IPR010987 -
Cam09g0603 224 CDD GST_C_Phi 93 210 IPR034347 -
Cam09g0603 224 CDD GST_N_Phi 2 77 - -
Cam09g0603 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cam09g0603 224 SFLD Main.5: Phi-like 1 213 - -
Cam09g0603 224 Gene3D - 88 210 - -
Cam09g0603 224 Gene3D Glutaredoxin 1 86 - -
Cam09g0603 224 SUPERFAMILY GST C-terminal domain-like 73 213 IPR036282 -
Cam09g0603 224 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Cam09g0603 224 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Cam09g0603 224 FunFam Glutathione S-transferase F2 89 210 - -
Cam09g0603 224 SFLD Main (cytGST) 1 213 - -
Cam09g0603 224 FunFam Glutathione S-transferase F2 2 86 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0601 Cam-Chr9:5927043 Cam09g0603 Cam-Chr9:5932415 4.30E-50 dispersed
Cam09g0602 Cam-Chr9:5928962 Cam09g0603 Cam-Chr9:5932415 5.70E-50 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0603 K00799 - vvi:100247639 301.982