Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0606 ATGGCCGGAGAAGTAGAAATAGACGATCTGAACAACAGTCCCAAAATGCTGTCACGGCCGAAACTACGGCGTTTCGACTCATTAGACATTGAATCGAACAAGCTGGACGGCGGCCATGGGCACCGCGCCGCCGCGGGGTGGTTGGTGACTCTGCAACTGGCGTTTCAGAGCATCGGGATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCAAAGCACTTTTCCGGCAGGGATAAAACATAAGGACGACGTTTTGGGAGTTCTATCGTTGATTTATTATACGCTCACTTTGATTCCTCTCTTTAAGTACGTCTTCATCGTCTTGCAGGCTAACGACAATGGCGACGGAGGCACATTTGCATTGTATTCTCTACTTTGCCGATATGCAAGAATAGGGTTAATACCTAGCCAACAAGTTGAGGATCGGGAGGTTTCTAATTACCGATTAGACATTCCCGACAACCGTGTGCGGCGGGCGTCGTGGTTGAAGTCTCAACTCGAGAGCCGCCGCTCTGCCAAGCTTTTCTTGCTCTTTGCCACCATGCTCGGCACCTCCATGGTCATCGGTGACGGGGTTCTCACTCCTTGCATTTCTGTTTTGTCAGCTGTTGGAGGCATTAAGAGAGCTAGACCTTCAATAACACAAGATACAATAGTGGGGATATCAGCTGGTATATTGGTGTGTCTTTTCATGGCTCAAAGATTTGGAACAGACAAAGTTGGATACACATTTGCTCCAATTATATGCATTTGGTTCAGTTTCATAGCTGCCATTGGTTTCTACAATTTTGTCAAGTTTGATCCTTCAGTCATCAAAGCTTTAAACCCTAAATATATCATTCACTATTTTATAAGGAACAAAACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCAGTGTGAAATCAATTCAAATAAGCATGTGTGCTGTTACCTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTACCTTCACACACACATTAATGAAGTTGGAGACACCTTCTTCAAATCCATTCCAGAACGTTTATACTGGCCAATGTTTGTGGTGGCCGTATTATCAGCCATTATTGCAAGCCAAGCTATGATTTCAGGAACATTCTCTATCATTCAACAATCCCTTTCACTTGGGTGTTTCCCAAGAGTCAAAGTTGTTCATACTTCTTCCAAGTATGAAGGCCAAGTTTATATCCCTGAGGTTAACTTTCTACTCATGCTTGCTTGTTTGGTTGTCACTCTTGCCTTCAAGGAGACTGACAAGATAGGAAATGCCTATGGCATAGCTGTTGTGTTTGTGATGACTCTCACATCCTCATTTTTAGTATTAATCATGATCATGATATGGAAAACCCACATGATTTTGATAATCATTTACATTCTTGTCATTGGGTCAGTGGAACTTCTTTATTTGAGTTCAGTTCTTTACAAGTTTGATCAAGGAGGTTACCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATAATGTATACTTGGAACACTGTCTATAGAAGAAAATACTATTATGAGCTTGACAACAAGATCTCTTCTCATCAACTCAAGGACATTGTATCAAATGCCAATCCTTGTAGAGTTCAAGGCCTTGCCATTTTCTACTCTGAGCTTGTACAAGGCATTCCTCCCATTTTCAAGCTTTACATGGCCAACGTCCCCGTCCTTCATCGAGTCCTCGTCTTCGTCTCGATCAAGTCGTTGCCTATTAGCAAGGTCCCATTAGACGAGCGGTTTCTCTTTTGCAGAGTTGAGCCGAGAGAGCTTAATATCTTTCGATGCGTCGTGCGATACGGGTACACAGACGATCGAAACGAGCGTGAGTCGTTCGAGATGAGTTTGGTGGAGAGATTGAAAGGGTTCTTAAGGGATGATGTTAGGGTTACTACCAAAGTGGAGGAGGAGAAAGATCATGAGAATGGGATAATAATTGAGGAAGAGAAACACAAGATTAGAGAAGTGGAATTGGAGGATGACATTGAGGAAGTTGATAAAGCTTGGGAAAATGGTGTGGTTCATTTGGTTGGAGAAAGTGAAGTTGTTGCTAAGGAAGGATCTAATATTTGGAAGAGGGTTTTGATTGATTATGCTTACAATTTCTTGAAGAACAATTTGAGACAAAGTGAGAGAGTCTTTGATATTCCTCACAAACGTTTGCTCAAAGTGGGAATGACATATGAACTTTAA 2259 42.67 MAGEVEIDDLNNSPKMLSRPKLRRFDSLDIESNKLDGGHGHRAAAGWLVTLQLAFQSIGIVYGDIGTSPLYVFQSTFPAGIKHKDDVLGVLSLIYYTLTLIPLFKYVFIVLQANDNGDGGTFALYSLLCRYARIGLIPSQQVEDREVSNYRLDIPDNRVRRASWLKSQLESRRSAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKRARPSITQDTIVGISAGILVCLFMAQRFGTDKVGYTFAPIICIWFSFIAAIGFYNFVKFDPSVIKALNPKYIIHYFIRNKTQAWISLGGIVLSITGTEALFADVGHFSVKSIQISMCAVTYPALLLAYTGQASYLHTHINEVGDTFFKSIPERLYWPMFVVAVLSAIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSSKYEGQVYIPEVNFLLMLACLVVTLAFKETDKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHMILIIIYILVIGSVELLYLSSVLYKFDQGGYLPLAFAFALMAIMYTWNTVYRRKYYYELDNKISSHQLKDIVSNANPCRVQGLAIFYSELVQGIPPIFKLYMANVPVLHRVLVFVSIKSLPISKVPLDERFLFCRVEPRELNIFRCVVRYGYTDDRNERESFEMSLVERLKGFLRDDVRVTTKVEEEKDHENGIIIEEEKHKIREVELEDDIEEVDKAWENGVVHLVGESEVVAKEGSNIWKRVLIDYAYNFLKNNLRQSERVFDIPHKRLLKVGMTYEL 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5960230 5972276 + CaPI482276_09g006060.1 Cam09g0606 134935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0606 752 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 44 751 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam09g0606 752 Pfam K+ potassium transporter integral membrane domain 53 539 IPR053951 -
Cam09g0606 752 Pfam K+ potassium transporter C-terminal domain 554 752 IPR053952 -
Cam09g0606 752 NCBIfam potassium uptake protein 53 751 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0606 Cam-Chr9:5960230 Cam11g0036 Cam-Chr11:1954642 1.20E-184 dispersed
Cam09g0606 Cam-Chr9:5960230 Cam09g0607 Cam-Chr9:5978585 2.30E-292 tandem
Cam10g1043 Cam-Chr10:22892577 Cam09g0606 Cam-Chr9:5960230 2.30E-287 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0606 K03549 - csv:101204520 1274.61