Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0653 ATGTCCCTTTCTCCCCATCTTTTGCTCCTTCTTCTCACTATAGCATCCCTTTCTGCCGCCGCCGACGCCGTTGAATGCCCTCTCAATTTCACCGTCCTTCGCCAGTTCTCCCAGGGCTCCGCCGTTTCCCGCCCCGATTTCTCCGACGAATGTCAATACATCCGCCTCGGTCTCCGCCTCGTCCTCTCGCAGTACCTCAAACTCACCGGCTCCTTCTTGCCCCCGGTGAACTCTTCCGATTCATGCTGGAATTCTTACCAATCGATAGTGAATGTCACATGGCCGAATTTCGACATTCGGAGCTCTTGCGGGTTTCAAACCGGGTGGATCTCACAGGGCTGTATGAACATCAGGACCAAATCCGAGTTCGAGAGAATCGTTCCTAAATCGGCCCTCGATGGTGTTGTTGCGAACTGTAATCAATCGCTTGAGAATGGTTCCCCCTGTGCCTCGTGCACGACCAGGCTCGCGATCGTTCAGGCCTCGTTCTTGACCGGTCCGTCGATCGGCAATGTCACCGATTGCCCCGCATATCCGTCGATCTACGTGGCGGCGTTTGTGAATCAGTTCGGACCGACCGATTGGGGAACTGCCAAATGCTTATTCTCGCTCCATCCCCTTTCGTCGGGGGATTCGAGGAGCAAGAAGCGGAATACGGTGGTGTTAGTGGTTTTAATTTGCTGTGGCGTTGCGGCAGCAGCGGTGGCGGTTGCAGGCGGGTTGTTTTTCTGGCGGAAACAGGGGAAAGTGAAGAAGAACGATAGAATTGGTAGAGTTGAGACAGGGTTGGGTTCTGGATTGGAGTCGATAAGTGCAAGCACTACTTTGGTGAAGTTCACATTCGATGAAATCAAGAGGGCGACAAGGAATTTTTCTAGAGATAACATAATTGGGAGAGGGGGTTATGGAAATGTGTATAAAGGGGTTCTATCAGATGATTCTGAAGTTGCATTGAAGAGGTTTAAGAACTGTTCTGCAGCAGGGGACGCCATTTTTGCTCATGAAGTGGAGGTAATTTCAAGTGTCAGGCATGTTAATCTTGTTGCTTTAAGAGGATATTGTATTGCAACTACACCAATGGAGGGTCACCAGAGAATAATTGTGTGTGATCTGATGAAGAATGGGAGTCTTTATGACCATTTGTTTGGGTTTTCAGATAAGAGGTTGAGTTGGCCAATTAGGCAAAAGATTGCTCTTGGCACAGCTAGGGGATTGGCTTATCTGCATTATGGAGCTCAGCCTGCCATTATCCATAGAGATATCAAAGCCAGCAACATTCTTTTGGATGAAAACTTTGATCCCAAGGTGGCTGACTTTGGTTTAGCCAAGTTCACTCCAGAAGGAATGACTCATTTGAGCACAAGAGTTGCTGGAACTATGGGGTATGTGGCGCCCGAGTACGCTTTATACGGCCAGTTGACGGAGAGGAGTGATGTGTATAGCTTTGGAGTTGTTTTGCTCGAGCTTTTGAGTGGGAGGAAGGCACTCGGGGTGAGGAGCCATGACAGCCAGCCCTTTCTAGTGACTGATTGGGCTTGGTCTTTGGTTAGGGAACAAAAAGCAATGGATGTTATTGAAGAAGGCATGCCAGAGCTGGGTTCTCCAGAGGTTGTTGAGAAGTATGTATTGATTGCTGTTCTTTGTTCCCATCCCCAGCTCTATGCCAGGCCAACAATGGATCAAGTTGTGAAAATGTTGGAAACTGAGCTCTCTGTTCCTTCAATCCCGGAGAGACCCATCCCTCTAGTTGCTGATATTGATGAAATTGAGAGATCTATGAGTAGTAGTGGTTCGGCTCAGCATTCTGGTTCAGTTGGCTTTCATAGTTTCACATTACAAAATGACCATAGGTAG 1854 48.54 MSLSPHLLLLLLTIASLSAAADAVECPLNFTVLRQFSQGSAVSRPDFSDECQYIRLGLRLVLSQYLKLTGSFLPPVNSSDSCWNSYQSIVNVTWPNFDIRSSCGFQTGWISQGCMNIRTKSEFERIVPKSALDGVVANCNQSLENGSPCASCTTRLAIVQASFLTGPSIGNVTDCPAYPSIYVAAFVNQFGPTDWGTAKCLFSLHPLSSGDSRSKKRNTVVLVVLICCGVAAAAVAVAGGLFFWRKQGKVKKNDRIGRVETGLGSGLESISASTTLVKFTFDEIKRATRNFSRDNIIGRGGYGNVYKGVLSDDSEVALKRFKNCSAAGDAIFAHEVEVISSVRHVNLVALRGYCIATTPMEGHQRIIVCDLMKNGSLYDHLFGFSDKRLSWPIRQKIALGTARGLAYLHYGAQPAIIHRDIKASNILLDENFDPKVADFGLAKFTPEGMTHLSTRVAGTMGYVAPEYALYGQLTERSDVYSFGVVLLELLSGRKALGVRSHDSQPFLVTDWAWSLVREQKAMDVIEEGMPELGSPEVVEKYVLIAVLCSHPQLYARPTMDQVVKMLETELSVPSIPERPIPLVADIDEIERSMSSSGSAQHSGSVGFHSFTLQNDHR 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6477755 6479608 + CaPI482276_09g006530.1 Cam09g0653 134982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0653 617 MobiDBLite consensus disorder prediction 591 611 - -
Cam09g0653 617 PANTHER OS01G0750732 PROTEIN 49 594 IPR050885 -
Cam09g0653 617 MobiDBLite consensus disorder prediction 591 617 - -
Cam09g0653 617 Gene3D Transferase(Phosphotransferase) domain 1 372 581 - -
Cam09g0653 617 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 252 370 - -
Cam09g0653 617 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524(InterPro)
Cam09g0653 617 CDD STKc_IRAK 297 567 - -
Cam09g0653 617 SMART serkin_6 291 566 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0653 617 Gene3D Phosphorylase Kinase; domain 1 263 370 - -
Cam09g0653 617 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 372 574 - -
Cam09g0653 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0653 617 SUPERFAMILY Protein kinase-like (PK-like) 268 567 IPR011009 -
Cam09g0653 617 Pfam Protein kinase domain 293 511 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0653 617 ProSiteProfiles Protein kinase domain profile. 291 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0653 617 Pfam SPARK 23 175 IPR043891 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0653 Cam-Chr9:6477755 Cam10g2162 Cam-Chr10:35118581 9.50E-74 dispersed
Cam05g1129 Cam-Chr5:10486718 Cam09g0653 Cam-Chr9:6477755 7.60E-99 transposed
Cam06g0563 Cam-Chr6:7699882 Cam09g0653 Cam-Chr9:6477755 4.40E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85427 PF00069 Pkinase 7.10E-41 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0653 - - - 0.0