Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0661 ATGCTCTCATCAATCATCATCCACATGTTTTGCTGCAGCAATCAATGGAGTCGAGTACAGGCTTCGGAATCTGAAATTGGAATCTGCTATTGCTTGTCGAGGATGCTTCCGTGGGGAGGTCTTAGTTGCTGTTTGAGTGCAGCTGCTCTTTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTACTGAAATCTGCCACGCGGGTCAATCAGTTGAAGGAATTGGCTCAATTGCTTGAGGCAGAATGTCTATTACCTCTGGTTGTTGCAATTTCTGGAAGAGTTAGCTCTGATACACCAATAAATTGCGAATTTAGTGGTTTAAGGGGTGTAATTGTGGAGGAAACGGCAGAACAACACTTTTTAAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTAGGAGCTCGAAATGCCACAAATTTTATATTACCAGTAGTGAGTGAGGTTTTTGAAGAGTCTGGCAGATCCCTTATGCGTGGCACTTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCGAATAGAACGCGTTCTACCTACTGGTACTTCCTTGACTGTTGTTGGTGAGGCTGCCAAAGATGACATTGGTACCATCAGAATTCAACGTCCACACAAAGGACCATTTTATGTCTCCCCAAAAACTATCGATCAACTCATAAGCAATCTTGGGAAGTGGGCCAGGTGGTACAAGTATGCTTCCATGGGTTTGGGTATATTTGGTTTGTATCTGGTCACAAAGCATGCTATTCTTTATCTCATGGAGAGAAGGCGTCGCTGGGAATTGCAGAAAAGGGTCCTTGCTGCAGCTGCCAAAAGATCAAGCCAAGAAAATGAAGGGGAAAATGAAAAGGCCAGCAATGGAACAGATGGTACAAAGAGAGACCGGTCAATGCCAGATCTTTGTGTAATATGTCTCGAGAGAGACTACAATGCTGTTTTTGTCCCGTGCGGCCATATGTGCTGCTGTGTAGCATGTTGTTCACATTTAACAAACTGTCCACTCTGTCGTAGACGAATTGAGCTGGTAGTTAAGACTTTCCGCCATTGA 1131 44.56 MLSSIIIHMFCCSNQWSRVQASESEIGICYCLSRMLPWGGLSCCLSAAALYLLGRSSGRDAELLKSATRVNQLKELAQLLEAECLLPLVVAISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVVGARNATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASMGLGIFGLYLVTKHAILYLMERRRRWELQKRVLAAAAKRSSQENEGENEKASNGTDGTKRDRSMPDLCVICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTFRH 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6571861 6581595 - CaPI482276_09g006610.1 Cam09g0661 134990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0661 376 SUPERFAMILY RING/U-box 328 370 - -
Cam09g0661 376 Pfam Zinc finger, C3HC4 type (RING finger) 327 368 - -
Cam09g0661 376 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 296 375 IPR013083 -
Cam09g0661 376 Pfam E3 Ubiquitin ligase 119 269 IPR022170 GO:0004842(InterPro)|GO:0006996(InterPro)|GO:0016567(InterPro)
Cam09g0661 376 MobiDBLite consensus disorder prediction 303 320 - -
Cam09g0661 376 ProSiteProfiles Zinc finger RING-type profile. 329 364 IPR001841 -
Cam09g0661 376 MobiDBLite consensus disorder prediction 300 320 - -
Cam09g0661 376 PANTHER - 35 372 IPR044231 GO:0004842(InterPro)|GO:0016567(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0661 K15688 - csv:101218196 649.047