Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0713 ATGGGTAACGCCGATTACGTGTACCCATCATCCACGGCAGCAGGGGATGGCGGCGAGTGCATACACAGGGCGGCGATTCCGCCGGCGCAGCCGTTCGTGAAGTCGCTGAAGAACGGTCTGAAGGAGACATTCTTCCCGGACGACCCGCTCCGGCAGTTCAAGAATCAGCCGGCGGGAAGGAAGATAATTCTGGGTTTGCAGTACTTTTTTCCGGTGGTGGAATGGGGGCCGCGCTATAATTTAGGGCTTCTGAAATCGGATCTTATCTCTGGAATCACCATTGCTAGCCTCGCCATTCCTCAGGGCATTAGCTACGCGAAGCTTGCTAACTTGCCTCCTATACTCGGCCTCTATTCTAGTTTTATTCCGCCGTTAATTTATGCGATGATGGGAAGTTCAAAGGACTTGGCCGTCGGAACAGTGGCAGTGGCGTCACTTCTGATTAGCTCAATGTTAGGAGCAGAGGTTAACCCTGTTCAAAACCCCACTCTTTATCTCCATCTTGCTTTCACCGCAACTTTCTTCGCCGGAGTCTTCCAAGCCTCTTTAGGGCTCTTAAGGCTAGGGTTCATTGTTGATTTCTTGTCACATGCAACCATTGTTGGGTTCATGGCGGGCGCTGCCACGGTGGTGTGCCTACAGCAACTCAAAGGCATCCTAGGGCTAACCCATTTCACCCACGCGACCGACCTCGTTTCCGTCCTCCGCTCCGTCTTCTCCCAAGTTCACCAGTGGAGATGGGAAAGTGGGGTCTTGGGATGCTGTTTTCTCTTCTTCCTCCTCATCACTAGATACTTTAGCAAGAAAAAGCCAAAGTTCTTTTGGATATCAGCAATGGCACCTTTGACCTCAGTGATTTTAGGAAGCCTTCTAGTGTTTCTTACTCACGCTGAAAAACACGGCGTCGAAGTGATTGGAGAATTGAAGAAAGGGCTAAATCCAGTGTCAATTACAAATTTGGTGTTTGTGTCACCTTATCTTTCAACTGCCATTAAAACTGGCATCATCACTGGCGTCATAGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCGATGTTCAAGCATTACAACATCGATGGCAACAAAGAAATGGTAGCCATTGGCACAATGAACATGGTCGGCTCTTGCTTCTCTTGCTATCTCACAACAGGGCCCTTTTCGCGATCGGCTGTGAATTACAATGCAGGATGCAAAACCGCGGTATCAAACGTGGTAATGGCAATTGCAGTGATGTTGACATTGTTATTCTTGACTCCTCTGTTCCACTACACTCCTCTGGTGGTGCTTTCTTCCATCATCATTTCCGCCATGCTTGGCCTCATTGATTACGAAGCTGCTATTCACTTATGGAAGGTTGATAAATTTGATTTCCTTGTCTGCATTGGCGCTTATGCTGGTGTTGTCTTTGCCAGTGTTGAAATTGGCTTGGTCATTGCGGTGGTGATATCTCTGCTTAGACTACTTTTGTTCGTTGCGAGGCCGAGGACGCTTGTGCTTGGAAACCTTCCCAATTCCACAGTTTACAGGAACGTAGAGCAATACCCGAATGCCGATCATGTTCCTGGCATTCTCATACTTGAGATTGACGCTCCCATTTACTTTGCTAATTCCAGCTACTTGAGAGAAAGGATTATAAGGTGGGTTGATGAAGAGGAAGATAGGATAAAAGCTTCGGGTGAAAGTACCTTACAATATGTCGTATTGGACATGAGTGCTGTTGGCAACATTGATACAAGTGGAATAAGTATGTTTGAAGAGATGAAGAAGATTTTAGAAAGAAGGGGATTGAAGATAGTTTTGGCCAACCCTGGAGCTGAGGTAATGAAGAAGCTGGACAAGGGCAAGTTCATTGAGACCCTCGGACACGAATGGATCTATCTAACAGTTGCCGAAGCTGTAGCGGCCTGCAACTATATGCTTCACTCTTGCAAACCGAACCCTGTAACTGATGAGAAAGCTGAGCCATGGAACAATGTGTAA 1986 47.33 MGNADYVYPSSTAAGDGGECIHRAAIPPAQPFVKSLKNGLKETFFPDDPLRQFKNQPAGRKIILGLQYFFPVVEWGPRYNLGLLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSKDLAVGTVAVASLLISSMLGAEVNPVQNPTLYLHLAFTATFFAGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLTHFTHATDLVSVLRSVFSQVHQWRWESGVLGCCFLFFLLITRYFSKKKPKFFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGLNPVSITNLVFVSPYLSTAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNMVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFHYTPLVVLSSIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYAGVVFASVEIGLVIAVVISLLRLLLFVARPRTLVLGNLPNSTVYRNVEQYPNADHVPGILILEIDAPIYFANSSYLRERIIRWVDEEEDRIKASGESTLQYVVLDMSAVGNIDTSGISMFEEMKKILERRGLKIVLANPGAEVMKKLDKGKFIETLGHEWIYLTVAEAVAACNYMLHSCKPNPVTDEKAEPWNNV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7098159 7106216 - CaPI482276_09g007130.1 Cam09g0713 135042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0713 661 Gene3D STAS domain 495 641 IPR036513 -
Cam09g0713 661 CDD STAS_SulP_like_sulfate_transporter 516 631 - -
Cam09g0713 661 Pfam STAS domain 516 634 IPR002645 -
Cam09g0713 661 SUPERFAMILY SpoIIaa-like 517 639 IPR036513 -
Cam09g0713 661 ProSiteProfiles STAS domain profile. 515 638 IPR002645 -
Cam09g0713 661 Pfam Sulfate permease family 84 464 IPR011547 GO:0016020(InterPro)
Cam09g0713 661 PANTHER SULFATE TRANSPORTER 61 639 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam09g0713 661 NCBIfam sulfate permease 71 634 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam09g0713 661 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cam09g0713 661 FunFam Sulfate transporter 31 495 641 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1136 Cam-Chr6:21621796 Cam09g0713 Cam-Chr9:7098159 1.50E-202 dispersed
Cam06g1137 Cam-Chr6:21672015 Cam09g0713 Cam-Chr9:7098159 6.20E-201 dispersed
Cam09g0713 Cam-Chr9:7098159 Cam11g1556 Cam-Chr11:28362295 7.30E-205 dispersed
Cam09g0218 Cam-Chr9:2819041 Cam09g0713 Cam-Chr9:7098159 1.20E-215 transposed
Cam11g0135 Cam-Chr11:2973139 Cam09g0713 Cam-Chr9:7098159 2.40E-208 transposed
Cam05g0565 Cam-Chr5:5020315 Cam09g0713 Cam-Chr9:7098159 1.00E-283 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0713 K17471 - csv:101222260 1242.25