Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g0728 | ATGGCGAACAATCATTCCGATACTCCGGCTGATGATTTCCTCGAGCAGATTCTTGGGATTTCCCCTTTTGGTTCGTCGGACCAAGGGTTAGCTGGAACTGACGGCGGATTGGCCGGAGCTGCTGCTGCTGCTGCTGCTGCTGCGGCAGCGGCGGCGGCGGCTCAGGGTCAGGCTCCGATGATGCTTCAGCTTAGCTCCGGCGACGGTGGTGGTCATATCGCTACGATTGGGAGTGGTAGTGTCGGTGGAGCTGGGTTTCATGGCGGACCCCCTTTTCCTCTGGGGTTGAGCTTGGACCAAGGGAAGAGTGGGTTTCTTAAGGCTGAGGAAGCCTCTGGAAGTGGAAAGCGGTATTGTGGTGATGTTGTTGATGTTCGAGCTTCGTCTGTAAAAAATGTTTTTCAAGGCCAACAAATGCATGCTACTATGGGTGCAGCCCCACATCCACCAGCAATGCGCCCTAGGGTACGTGCAAGACGAGGACAGGCGACTGATCCACATAGCATTGCAGAGCGGTTACGAAGAGAAAGGATTGCAGAGAGAATTAGGGCTTTGCAGGAGCTTGTTCCGAGTGTCAATAAGACGGATAGAGCTGCAATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACGTCTCCAAGTGAAGGTTCTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCACCACTTGTAACGGATATTCCACTATCATCAGTTGAGGAAGAAGGAAGTGAAGGTGGTAGGAACCAACCGGCATGGGAGAAGTGGTCGAACGATGGTACAGAGAGACAAGTTGCTAAACTCATGGAAGAAAATGTGGGAGCCGCAATGCAATTCCTTCAATCAAAGGCACTCTGCATCATGCCCATCTCGTTGGCTTCAGCGATTTATCACACGCAACCACCTGATAGCTCGAGCGTTGTGAAGCCAGAGAGTAACCCTCCTCCATAG | 957 | 52.25 | MANNHSDTPADDFLEQILGISPFGSSDQGLAGTDGGLAGAAAAAAAAAAAAAAAQGQAPMMLQLSSGDGGGHIATIGSGSVGGAGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGDVVDVRASSVKNVFQGQQMHATMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESNPPP | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7333586 | 7336722 | + | CaPI482276_09g007280.1 | Cam09g0728 | 135057 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g0728 | 318 | Gene3D | - | 157 | 219 | IPR036638 | GO:0046983(InterPro) | |
Cam09g0728 | 318 | MobiDBLite | consensus disorder prediction | 143 | 166 | - | - | |
Cam09g0728 | 318 | MobiDBLite | consensus disorder prediction | 242 | 261 | - | - | |
Cam09g0728 | 318 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 160 | 221 | IPR036638 | GO:0046983(InterPro) | |
Cam09g0728 | 318 | Pfam | Helix-loop-helix DNA-binding domain | 167 | 212 | IPR011598 | GO:0046983(InterPro) | |
Cam09g0728 | 318 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 103 | 297 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Cam09g0728 | 318 | SMART | finulus | 168 | 217 | IPR011598 | GO:0046983(InterPro) | |
Cam09g0728 | 318 | FunFam | Basic helix-loop-helix transcription factor | 157 | 219 | - | - | |
Cam09g0728 | 318 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 162 | 211 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g1654 | Cam-Chr3:31655330 | Cam09g0728 | Cam-Chr9:7333586 | 1.70E-74 | dispersed | |
Cam06g1362 | Cam-Chr6:25018314 | Cam09g0728 | Cam-Chr9:7333586 | 1.50E-46 | dispersed | |
Cam07g0017 | Cam-Chr7:1376871 | Cam09g0728 | Cam-Chr9:7333586 | 3.40E-17 | dispersed | |
Cam09g0728 | Cam-Chr9:7333586 | Cam09g0835 | Cam-Chr9:8577032 | 6.70E-15 | dispersed | |
Cam09g0728 | Cam-Chr9:7333586 | Cam02g1763 | Cam-Chr2:30763674 | 1.10E-44 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52561 | PF00010 | HLH | 1.20E-07 | No_clan | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g0728 | - | - | - | 0.0 |