Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0739 ATGATGGAAGAGGTCGAAGAAGCTAATAGGGAAGCTGTTGAGAGTTGTCATAAAGTGTTGAATCTCTTGACTGTGGCTTCCTCGTCTCAAGATCAGTTGAAGCTTAGGAGTCGTTTAATGGCGGAAACTGGAGACGCTGTGTTTAAGTTTAGGAAAGTTTTGTGTCTTCTTGATTCTTCTGGGTTGGGTCATGCAAGGGTCAGGAAAAAGAAGGTCAAGAACTTTTTGTTTAATTCCTCTTCTTCCCCTTTTCCTCTTCCCCAATCTTTGTTCTTAGAAACTTCTTCCCCTAATTGCAGAATGGACCTTCTCCAGGGCAGGAATTTGCAGATGGGTCCTCTTTGTTTGGGGAACCCATCTTTGGAATTGAACTCTAATGCCAAAAGTTGTTCAACCCAACAAATACAATCTCAATCTGCTGCTCTTTATCATCATCATCATCATCATCACTTGCTTCAGAACAGGGTGTTGTTGAACAATAATCCTAATCCTAATCCTAATCCTAATCCTCCACAGCCTGAAATGATGTATCTTAGGAGCAATAATGGCATTAACTTAAATTTTGATAGCTCTAGTTGCACACAACACACAATGTCATCCACTAGGTCGTTTATATCTTCCTTGAGCATTGATGGGAGTGTGGCTAGCTTGGATGGGAGTGCCTTTCATTTGATCGGGGCACCCCGGTCTTCCGATCAGAATTCGCATCCTAAGAGGAAGTGCAGTGGGAGAGGGGAAGACGGGAGTGTTAAATGTGGAAGCAGTGGGAGATGTCACTGCTCAAAAAAGAGGAAACATAGAGTAAAGCGATCAATTAAGGTGCCCGCGATAAGTAACAAGCTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCACCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGCTGTCCAGCGAGGAAGCACGTTGAGCGGTGTCTCGAGGAACCTTCCATGCTCATTGTTACATATGAAGGTGAACACAACCATCCTAGAATACCTTCTCAACCTGCAAATACTTGA 1062 43.6 MMEEVEEANREAVESCHKVLNLLTVASSSQDQLKLRSRLMAETGDAVFKFRKVLCLLDSSGLGHARVRKKKVKNFLFNSSSSPFPLPQSLFLETSSPNCRMDLLQGRNLQMGPLCLGNPSLELNSNAKSCSTQQIQSQSAALYHHHHHHHLLQNRVLLNNNPNPNPNPNPPQPEMMYLRSNNGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVASLDGSAFHLIGAPRSSDQNSHPKRKCSGRGEDGSVKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQPANT 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7474378 7476094 - CaPI482276_09g007390.1 Cam09g0739 135068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0739 353 SUPERFAMILY WRKY DNA-binding domain 283 345 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g0739 353 MobiDBLite consensus disorder prediction 227 256 - -
Cam09g0739 353 FunFam WRKY transcription factor 65 269 346 - -
Cam09g0739 353 SMART WRKY_cls 285 345 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g0739 353 Gene3D WRKY domain 270 347 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g0739 353 ProSiteProfiles WRKY domain profile. 280 346 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g0739 353 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 349 IPR044810 GO:0003700(InterPro)
Cam09g0739 353 Pfam Plant zinc cluster domain 238 283 IPR018872 -
Cam09g0739 353 Pfam WRKY DNA -binding domain 287 344 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2221 Cam-Chr5:30489146 Cam09g0739 Cam-Chr9:7474378 1.50E-48 dispersed
Cam08g1834 Cam-Chr8:24451891 Cam09g0739 Cam-Chr9:7474378 2.40E-17 dispersed
Cam09g0739 Cam-Chr9:7474378 Cam10g1124 Cam-Chr10:24329911 2.20E-22 dispersed
Cam07g0065 Cam-Chr7:1789548 Cam09g0739 Cam-Chr9:7474378 5.50E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52564 PF03106 WRKY 3.50E-26 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0739 - - - 0.0