Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g0753 | ATGTCAATTGTTAATGATTTGTTTGGTAATTACCAAGAAGATTTCTTGTGGAACAATAATCAGGATGAAAGTTTAATTTCCGGGGAAGAGAATTATTTCAATTACTTGAAAGAGGTGTTGTTTGATGATATTTTTGAGGAGGCGGCCGGAGGAACGACGTCGTCGGATTCGAGTTCTTGTTCGTCTCCAGTGATGCAAGTTAAGGAGGAGATTGAGGAAGGGAGTTTTGGTGACGACATCGTTGTACAGGAAGATGAATCACGTAAGGAGGATAGGGTTTATCGAGGGGTGCGAAGGAGGCCGTGGGGGAAGTACGCAGCCGAGATTAGGGATTCGACCCGACAAGGGGTGAGGGTGTGGTTGGGGACGTTTGATAGCGCCCAAGCGGCTGCGTTGGCGTATGACCAAGCCGCATTTTGCATGAGAGGAGGGTTAGCCACGCTTAACTTTCCGGTCGAGGTTGTACGAGAGTCACTCCGAGAGATGAAGTACCGGTGGGAGGCTGGGTGCTCGCCGGTCTTGGCGCTTAAGCGGCGCCACTCGATACGGAGGAAGAAGATGGCTGAGGTGGAGAAGATGGAGAAGAAGATGGAGAAGAAGAAGAAGAAGCAAACTGTAGTTGTTTTTGAGGATTTAGGTGTAGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA | 678 | 47.94 | MSIVNDLFGNYQEDFLWNNNQDESLISGEENYFNYLKEVLFDDIFEEAAGGTTSSDSSSCSSPVMQVKEEIEEGSFGDDIVVQEDESRKEDRVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAQAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCSPVLALKRRHSIRRKKMAEVEKMEKKMEKKKKKQTVVVFEDLGVEYLEELLSLTS | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7671872 | 7672549 | + | CaPI482276_09g007530.1 | Cam09g0753 | 135082 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g0753 | 225 | ProSiteProfiles | AP2/ERF domain profile. | 93 | 151 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam09g0753 | 225 | FunFam | Ethylene-responsive transcription factor 2 | 92 | 153 | - | - | |
Cam09g0753 | 225 | Coils | Coil | 183 | 203 | - | - | |
Cam09g0753 | 225 | PANTHER | DNA-BINDING DOMAIN | 62 | 196 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Cam09g0753 | 225 | SUPERFAMILY | DNA-binding domain | 93 | 153 | IPR016177 | GO:0003677(InterPro) | |
Cam09g0753 | 225 | SMART | rav1_2 | 93 | 157 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam09g0753 | 225 | Pfam | AP2 domain | 93 | 143 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam09g0753 | 225 | Gene3D | AP2/ERF domain | 93 | 154 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam09g0753 | 225 | CDD | AP2 | 94 | 152 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam09g0753 | 225 | PRINTS | Ethylene responsive element binding protein signature | 94 | 105 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam09g0753 | 225 | PRINTS | Ethylene responsive element binding protein signature | 117 | 133 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g0098 | Cam-Chr7:2132818 | Cam09g0753 | Cam-Chr9:7671872 | 1.30E-41 | dispersed | |
Cam09g0753 | Cam-Chr9:7671872 | Cam10g0235 | Cam-Chr10:4112772 | 1.90E-19 | dispersed | |
Cam09g0752 | Cam-Chr9:7659532 | Cam09g0753 | Cam-Chr9:7671872 | 3.20E-20 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52567 | PF00847 | AP2 | 1.10E-14 | CL0081 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g0753 | K14516 | - | csv:101205053 | 312.383 |