Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0779 ATGGATTCGGCGAGGAGTTGGTTTAATAAGCTTCAGCCAAGAGATAGGTTGAGGGGTTCTACGAAGAAGAAGGATAATAGTATGGGAGAGAATGAGGATGGTACTGCTACTGATCAAACGGATGAAGAAGCGCTTTCTAATATTACTAAGCAGAAGGTTGCTGCGGCAAAGCAGTATATTGAGAATCATTACAAGGAGCAAATGAAGAATCTGCAGGAGAGAAAGGAAAGACGAAATATATTGGAAAAGAAGTTGGCTGATGCTGATGTTTCTGAAGAAGATCAAAACAATTTACTTAAGTTCTTAGAGAAGAAGGAAACTGAATACATGCGCCTCCAAAGGCACAAAATGGGTGTTGATGATTTCGATTTACTAACAATTATTGGCAAAGGTGCTTTTGGGGAGGTTCGTGTTTGTAGAGAGAAGACTACAGGTCAGGTGTATGCTATGAAAAAGCTTAAAAAATCAGAGATGCTTCGAAGGGGCCAGGTGGAGCATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTAGACAGCAACTGTATTGTGAAACTCTATTGTTCTTTTCAAGATGATGAGTTTCTTTATCTTATTATGGAGTACCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCAAGGTTTTACGTTGGAGAGATAGTTTTGGCTATTGAATCTATTCATAAGCACAATTACATCCATAGAGATATTAAGCCTGACAACTTGCTGCTTGATAAATTTGGGCACTTGAGACTCTCAGACTTTGGACTATGCAAACCGTTAGATTGCAGTACACTCCAAGAACAAGATTTTGATGTAGGGAGTGTCCGTAATGGAGCTGGACAAAGTGATGAGCGCAATGCAACTCCCCGTACTCAACAAGAGCAACTACAACATTGGCAGAAGAATCGAAGAATGCTTGCTTATTCAACAGTTGGAACACCAGATTATATTGCTCCAGAGGTTTTGTTGAAGAAAGGTTATGGCATGGAATGTGACTGGTGGTCACTTGGAGCTATTATGTATGAAATGCTTGTTGGCTACCCACCTTTTTACTCTGATGATCCAATGTCGACATGTCGGAAGATTGTGAACTGGAGAACTCATTTGAAGTTCCCTGACGAGGCAAAGCTGTCTCCCCTGGCAAAAGATCTCATCAGCAGACTACTATGCAATGTTAACCAGAGGCTTGGTACAAATGGCGCAGATGAAATTAAGGTTCATCCGTGGTTTGAAGGTACTGAATGGGATAGGCTATACCAAATGGAAGCTGCATTTGTTCCTGAGGTTAAAGATGAGCTAGACACTCAAAATTTCGAAAAGTTTGAAGAGTCTGACTCGCAAAGCAGTACTTCATCTAAAACTGGTCCATGGAGAAAGATGCTTTCATCGAAGGACATCAACTTCGTTGGATATACTTACAAGAACTTCGAAATTGTCAACGATTATCAATTGCCTGGGATGGCTGAATTGAAGAAAAAATGCAGCAAACCCAAAAGACCGTCAATCAAGTCACTCTTTGATGGCGAGTCGGAGGCAGCAGACACATCTGATACACACACACCTACTCATAGTCAGCAGAACACTGAAGGTAGCTTTTCGAACTCAACATCTCCTAAACTGGATGAAGTTGAAATGGGGAAAGAGTCAATGTAA 1683 40.94 MDSARSWFNKLQPRDRLRGSTKKKDNSMGENEDGTATDQTDEEALSNITKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFDLLTIIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSTLQEQDFDVGSVRNGAGQSDERNATPRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPDEAKLSPLAKDLISRLLCNVNQRLGTNGADEIKVHPWFEGTEWDRLYQMEAAFVPEVKDELDTQNFEKFEESDSQSSTSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKCSKPKRPSIKSLFDGESEAADTSDTHTPTHSQQNTEGSFSNSTSPKLDEVEMGKESM 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7915457 7924090 + CaPI482276_09g007790.1 Cam09g0779 135108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0779 560 Pfam Protein kinase C terminal domain 439 483 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0779 560 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524(InterPro)
Cam09g0779 560 MobiDBLite consensus disorder prediction 289 303 - -
Cam09g0779 560 ProSiteProfiles Protein kinase domain profile. 122 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0779 560 Gene3D Phosphorylase Kinase; domain 1 112 207 - -
Cam09g0779 560 CDD MobB_NDR_LATS-like 56 117 - -
Cam09g0779 560 SMART serkin_6 122 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0779 560 MobiDBLite consensus disorder prediction 1 46 - -
Cam09g0779 560 Coils Coil 64 84 - -
Cam09g0779 560 Pfam Protein kinase domain 317 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0779 560 Pfam Protein kinase domain 124 273 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0779 560 MobiDBLite consensus disorder prediction 527 550 - -
Cam09g0779 560 FunFam Non-specific serine/threonine protein kinase 319 438 - -
Cam09g0779 560 MobiDBLite consensus disorder prediction 503 560 - -
Cam09g0779 560 SMART pkinase_C_6 421 485 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0779 560 CDD STKc_NDR_like 120 484 - -
Cam09g0779 560 FunFam Non-specific serine/threonine protein kinase 206 273 - -
Cam09g0779 560 ProSiteProfiles AGC-kinase C-terminal domain profile. 421 493 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0779 560 FunFam Non-specific serine/threonine protein kinase 93 205 - -
Cam09g0779 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0779 560 SUPERFAMILY Protein kinase-like (PK-like) 95 473 IPR011009 -
Cam09g0779 560 MobiDBLite consensus disorder prediction 283 303 - -
Cam09g0779 560 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 488 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cam09g0779 560 Gene3D Transferase(Phosphotransferase) domain 1 208 437 - -
Cam09g0779 560 MobiDBLite consensus disorder prediction 503 526 - -
Cam09g0779 560 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0720 Cam-Chr6:9751194 Cam09g0779 Cam-Chr9:7915457 4.40E-244 dispersed
Cam08g2069 Cam-Chr8:26225090 Cam09g0779 Cam-Chr9:7915457 8.90E-174 dispersed
Cam09g0779 Cam-Chr9:7915457 Cam10g1296 Cam-Chr10:26438098 5.30E-39 dispersed
Cam09g0779 Cam-Chr9:7915457 Cam03g1554 Cam-Chr3:30477118 7.80E-184 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85431 PF00069 Pkinase 1.10E-63 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0779 K08790 - csv:101221720 1062.37