Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0783 ATGATGGAGGCAGCTTGTAGACAGAGACCATGGATACTATTTGACCAAAACAAGGAGGATTCTTTGGAGTTCGAATCTATGGAGCAGAACCCCCCTCCACAATCTGACCTTTCAAAAGGGGTAGCTCATGGATGTCCAGAATGCAGTGACTGTCTGAAGGTCACTGCAAGGTGGCGGCCAGACGATGCAAGATCAGATATTCTTGAAGAGGCTGCTGTTTTTTATCCAACAGAGGAGGAATTTGCAGATACACTTCATTATATAGAAAGAATACGTTCAAGAGCAGAGTCAAGTGGAATCTGTCGCATAGTTCCTCCTCCATCATGGTTGCCTCCATGTCTTTTGAAGGGAAAGGAAACTTGGGAAAATTCTCCTTTCCTAGCCCACTATCAGCGGATTGATGGGTTACAGAAGACTTATGCATGTGGTCAATTTTCTAACCATAGTGGAAACATGAAGAATAAGAGGAGAAGGTTAGAGTATGCGTGTGTTAATGGTCATTTGATGGATCCTGATGAAAGTTGTGGTAGTGATGAGAAAGGCCCAAACTCAGATCTTGGTCGAGAGTTTACTCTAAAAGCTTTTAAAAGCTATGCCGATGACTTTAAATCCCAGTATTTCAGCAGTGGAAATAAGTGCACAAATACAGAAACAAAGTCATCCATGCTTCAAGAGCAGTGGGAACCGTTGGTGGATCAAGTAGAGGGTGAATATAGACGCATTCTCGAGAATCCAACTGAACAAATTGAGGTGCTATGTGGTGATAGTTCGGGTAGCCTTTCACTTGGCAGCGGATTTCCATCATCATCCAGTCCTTTGACTGAGCCAGGTCATGCTGATCATATGGACTCTGGATGGAACTTAAATAATTTACCTAGACTACCTGGTTCACTTCTTTCTTTGGATAGCTTCAAGACATATTCTATTTTGTCACCTCAAGTATGCGTGGGAATGTGCTTTTCTACCGCTTGTTGGCGAGTTGAAGAACACCACTTACCTTTGTTATGTTACTTGCACTTGGGAGCTCCTAAAATATGGTATGGCATTCCAGGAAGATACATTGATAAATTTGACGTAGCCATGAAGAGCCTTCCGGAATTTTTTGTGGAACAGAAAAGGTCTCGTAGAGGAATGGTCAATCAACCATCAATTGCCACATTGAAGAGAGAAGGTGTACCAATTTACCGTTGCATTCAAAATGCAGGAGAGTTTGTTCTCGTCTTTCCAGGAGCATGTCATTCAGGATTTAACTGTGGGTTTAATGTTACTGAAGAAGCCAATTTTGCTCCCCTTGACTGGTTGCCTCACGGTTATAATGCTACAGAGCTGTACTCTATAGAGAGAAGGAAGACGTTAATATCCTTCGATAGGCTGTTGCTTGGAGCAGCCACTGAAGCTGTGAAGGCACAGTGGGAACTCTCATTATGCAGGAAGGAAACCAAAGATAATTTACGATGGAAAAATGCCTGTGGAAAGCATGGGATATTAGCCCAGACATTCAAGTCTCGCATCAAAAGTGAAAGTCTCAGGAGGGAGTATCTTGCGACAGCTTCACAGACACGTGAAGTAACCGAAAGTTTTGATGCTGTCAGGAAGCGCGAATGCAGCATTTGCCTTTATGACTTACACTTGTCTGCAGCTGGTTGTTCATGTTCTGCTGATAGGTACTCTTGTTTGAATCACGCTAAGCAACTCTGTTCTTGTGCTTGGGTCAACAAATTCTTTGTCGTGCGGTACCAAATGGCCAACTTAAATCTTCTTCTTGAAGCCTTGGAAGGAAAACTAAGTGCAGTCTACAAATGGGCCAAAGAGAATCTTGGACTTGCTGTGCATTCCTACAAGAATAGTTCACTGCAATCTCAGCCTGCTGATACACCCCAGTCTTCACAAGGGCATCAATCCGAGGATGCAGAATCTCCAAATACTTTTAATAACTCGATCAATAGAATTAAGGCAGAGATAAAGGCACGTCTTCTTCAAGCGAAAACCTTGAAGAATATGAAAGGAAATGACAGGGTAATAGAATCCGTGGATGCAGTTAAAGACAATGGTATTGTCACAAATTTGGATTCGAGAATTCCAGCAGAAAAAACCGCATTGAAGCTACAGCCAGTGAGTTCGAATGAGCTCAAAGGAAAAGAGTGTACATCAACCCCAGCAGTAGTTTTAAATGAAAGAGGAGATGATTTAATCTTTTCACTCAATTTGGAGTCTTTTGAAACTTTACCTGAGAACTCAGTCTCAAGCTTCTCTGAATCCGATGACGATTGGTCAGATTCTGGCTTTTAA 2289 42.38 MMEAACRQRPWILFDQNKEDSLEFESMEQNPPPQSDLSKGVAHGCPECSDCLKVTARWRPDDARSDILEEAAVFYPTEEEFADTLHYIERIRSRAESSGICRIVPPPSWLPPCLLKGKETWENSPFLAHYQRIDGLQKTYACGQFSNHSGNMKNKRRRLEYACVNGHLMDPDESCGSDEKGPNSDLGREFTLKAFKSYADDFKSQYFSSGNKCTNTETKSSMLQEQWEPLVDQVEGEYRRILENPTEQIEVLCGDSSGSLSLGSGFPSSSSPLTEPGHADHMDSGWNLNNLPRLPGSLLSLDSFKTYSILSPQVCVGMCFSTACWRVEEHHLPLLCYLHLGAPKIWYGIPGRYIDKFDVAMKSLPEFFVEQKRSRRGMVNQPSIATLKREGVPIYRCIQNAGEFVLVFPGACHSGFNCGFNVTEEANFAPLDWLPHGYNATELYSIERRKTLISFDRLLLGAATEAVKAQWELSLCRKETKDNLRWKNACGKHGILAQTFKSRIKSESLRREYLATASQTREVTESFDAVRKRECSICLYDLHLSAAGCSCSADRYSCLNHAKQLCSCAWVNKFFVVRYQMANLNLLLEALEGKLSAVYKWAKENLGLAVHSYKNSSLQSQPADTPQSSQGHQSEDAESPNTFNNSINRIKAEIKARLLQAKTLKNMKGNDRVIESVDAVKDNGIVTNLDSRIPAEKTALKLQPVSSNELKGKECTSTPAVVLNERGDDLIFSLNLESFETLPENSVSSFSESDDDWSDSGF 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7953886 7958058 - CaPI482276_09g007830.1 Cam09g0783 135112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0783 762 Gene3D Cupin 56 429 - -
Cam09g0783 762 MobiDBLite consensus disorder prediction 743 757 - -
Cam09g0783 762 MobiDBLite consensus disorder prediction 743 762 - -
Cam09g0783 762 Pfam C5HC2 zinc finger 535 585 IPR004198 -
Cam09g0783 762 SMART JmjN_1 70 111 IPR003349 -
Cam09g0783 762 SMART cupin_9 280 445 IPR003347 -
Cam09g0783 762 Pfam jmjN domain 73 105 IPR003349 -
Cam09g0783 762 ProSiteProfiles JmjC domain profile. 280 445 IPR003347 -
Cam09g0783 762 Pfam JmjC domain, hydroxylase 313 428 IPR003347 -
Cam09g0783 762 SUPERFAMILY Clavaminate synthase-like 279 472 - -
Cam09g0783 762 ProSiteProfiles JmjN domain profile. 71 112 IPR003349 -
Cam09g0783 762 MobiDBLite consensus disorder prediction 617 643 - -
Cam09g0783 762 PANTHER LYSINE-SPECIFIC DEMETHYLASE 64 644 - GO:0000785(PANTHER)|GO:0005634(PANTHER)|GO:0006338(PANTHER)|GO:0010468(PANTHER)|GO:0032452(PANTHER)|GO:0034647(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0783 Cam-Chr9:7953886 Cam11g1090 Cam-Chr11:21067884 1.40E-175 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52570 PF02373 JmjC 9.80E-30 CL0029 Cam TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0783 K11446 - csv:101221486 1281.16