Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0786 ATGGCAGCCTCTTCTTCTTCTCCTTCTTCTCCTCCATGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCTCCTTATTTCCGCCACGAGCTCGGCGCCTCCCAGTTCTCTGCCATCCACAAAGTTTTCGGTGCAAGCAATGCTTCCAAGCTTCTCGCTCACCTCCCAGTCTCCCACCGTTGCGAAGCGGCGGTGACGATCTCATACGAAGCTCAAGCGAGACTTCAAGATCCGATCTACGGTTGCGTATCTCATATTTTCGCTCTCCAGCAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCTCAAATCCTTCTCAACAACTACACTACAAGAAACCCTATTGAATTACCTTACGAAAAATCTTCATTTTATTCCGACGACCCATTACTAGATCTTCAAAGTTGGCTTCTGGCGGAGAGCTGCAGCGCCGCCGCGCCGGAGTTTGAATCTGCAGCGGTGCCGTACTTTGAGATGAGCGTCGTCGATTCAAATCTCGCCGGAGATTTCTGTTGCTAA 555 48.83 MAASSSSPSSPPCGACKFLRRKCVNGCIFAPYFRHELGASQFSAIHKVFGASNASKLLAHLPVSHRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNYTTRNPIELPYEKSSFYSDDPLLDLQSWLLAESCSAAAPEFESAAVPYFEMSVVDSNLAGDFCC 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7981934 7982699 - CaPI482276_09g007860.1 Cam09g0786 135115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0786 184 Coils Coil 92 112 - -
Cam09g0786 184 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 125 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Cam09g0786 184 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Cam09g0786 184 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0090 Cam-Chr7:2055102 Cam09g0786 Cam-Chr9:7981934 1.40E-38 dispersed
Cam07g0091 Cam-Chr7:2064796 Cam09g0786 Cam-Chr9:7981934 2.00E-43 dispersed
Cam07g0344 Cam-Chr7:4628000 Cam09g0786 Cam-Chr9:7981934 2.50E-32 dispersed
Cam09g0786 Cam-Chr9:7981934 Cam10g1558 Cam-Chr10:29261220 2.60E-35 dispersed
Cam09g0786 Cam-Chr9:7981934 Cam05g0253 Cam-Chr5:2483260 5.80E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52571 PF03195 LOB 1.20E-34 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0786 K13945 - csv:101220863 335.109