Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0839 ATGAACGATGTGAGAGGTCAAGAACAAATTCCTGAATTAGATTTTGGAAAATTGGAAGTGGTGACGGCGCTCGGCCGGGGAGCGAAGGGAGTCGTGTTCTTGGCTCGAAATGCGGCAGGGGACGACGACGGCGAATGGTTGGCCTTGAAGGTGATTTCCAGAGAATTAATCGAGAGGAAGGCCAAGATTGTGAATAGCGATGGAGCTGAGTATCGCAGAGTTTGCTTTGAACGAGAAGTTTTGCGGCTTTTTCGGCATCCGCTTTTGCCTCGATTGCGAGGAGTTTTGAATACTCAGAAAGTTGTAGGTTACGCCATTGATTATTGTAATGGACGAGATCTTAATACTCTCAGGAAAAAACAGACCGAAAAAATGTTCTCCGACGACGTTATTAGATTTTACGCTGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGTCTAGGAATAGTTTACAGAGATTTGAAGCCGGAGAATGTTATGGTTCAACACAGCGGCCATATAATGCTTGTGGATTTTGATCTCTCTACCAGACTCTCTCAAAAATCTCCGAAATCGTCTCCGTCTCGGTCGCCGTCGCCATCGCCGGCGGTAGAGGTTTTGGCGGAGTCTAAATTCGCGATGAAGGAAAAGATTAACAAGAAAAAGAACAAGAAGCGATTCTTTCATTTTTACCGGTTCTGCAACTCCGGCGTATCACCGGAGGAATCCGAACATCAGGCTACGGCGGCGGAGAAACCACGATCGCTGCCGGAGTCGCCGGATTCGGAGTCGTCGGAGAAATCGAACTCGTTCGTGGGAACAGAGGACTACGTGGCACCGGAAATCGTTGCCGGGAAGGGTCATGACTTCGCCGTGGACTGGTGGTCACTCGGCGTAGTTCTGTACGAGATGCTGTACGGAACGACGCCATTTAGGGGCTCGAATCGGAAGGAAACATTCTACCGGATTCTAACGAAAACGCCGGATCTGTGCGGCGAAGCGACGGCGTTAAGGGATTTGATCAGGAAGTTGCTGGAGAAAGATCCGAAGAAGAGAATCGAACTGGAGGAAATCAAGGGCCACGATTTCTTTAAAGGGACTGACTGGGATTTAGTTCTGGAAATGCCCCGGCCGCCGTCGCTACCTGAAATGGCGGAAGAGGACATAAATGGAAATAACTTAATTGATGTGGAGTCTTTTGTACAAGACGTATTTTGCAGAGAAATGGAGAAGAAGAATCAAATTAACGGTGATGAAGGAAAAGGGTTAATTCCTAATTACACGGACTCTGACACATTTCATGTATTCTAA 1293 47.56 MNDVRGQEQIPELDFGKLEVVTALGRGAKGVVFLARNAAGDDDGEWLALKVISRELIERKAKIVNSDGAEYRRVCFEREVLRLFRHPLLPRLRGVLNTQKVVGYAIDYCNGRDLNTLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHSGHIMLVDFDLSTRLSQKSPKSSPSRSPSPSPAVEVLAESKFAMKEKINKKKNKKRFFHFYRFCNSGVSPEESEHQATAAEKPRSLPESPDSESSEKSNSFVGTEDYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTKTPDLCGEATALRDLIRKLLEKDPKKRIELEEIKGHDFFKGTDWDLVLEMPRPPSLPEMAEEDINGNNLIDVESFVQDVFCREMEKKNQINGDEGKGLIPNYTDSDTFHVF 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8679907 8681296 + CaPI482276_09g008390.1 Cam09g0839 135168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0839 430 ProSiteProfiles Protein kinase domain profile. 18 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0839 430 PANTHER FLIPPASE KINASE 1-RELATED 9 381 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam09g0839 430 Pfam Protein kinase domain 257 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0839 430 Pfam Protein kinase domain 19 188 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0839 430 MobiDBLite consensus disorder prediction 239 255 - -
Cam09g0839 430 SUPERFAMILY Protein kinase-like (PK-like) 16 384 IPR011009 -
Cam09g0839 430 FunFam Serine/threonine-protein kinase OXI1 113 181 - -
Cam09g0839 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0839 430 Gene3D Transferase(Phosphotransferase) domain 1 258 377 - -
Cam09g0839 430 Gene3D Phosphorylase Kinase; domain 1 18 112 - -
Cam09g0839 430 MobiDBLite consensus disorder prediction 236 265 - -
Cam09g0839 430 Gene3D Transferase(Phosphotransferase) domain 1 113 187 - -
Cam09g0839 430 SMART serkin_6 18 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0839 430 FunFam Serine/threonine-protein kinase OXI1 260 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2412 Cam-Chr2:36601438 Cam09g0839 Cam-Chr9:8679907 4.00E-76 dispersed
Cam09g0839 Cam-Chr9:8679907 Cam10g1296 Cam-Chr10:26438098 1.20E-54 dispersed
Cam09g0839 Cam-Chr9:8679907 Cam04g1010 Cam-Chr4:24292220 1.20E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85432 PF00069 Pkinase 4.60E-30 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0839 K20714 - csv:101223223 657.521