Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0892 ATGAGTTGCTTTCCATGTTTTTCATCTCATGGGAAAGCAGCAAGAAGAACAAAGAGTGGTAGAAAGGAACGGTCTGTTTCGTCGCATTCTCGTAGTCATAAACAACAACAACAACAACAACCGCCGCCGCCGCAACAACAACATCATCCGGCTCCTCCTCCTCCACGTCCTACGCCTACAGACATTCCAAAGGGAAATCAGGTTCAAAAGGAAGCAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAATGAGATTATTGGGGAAAAGAATAACATTGCAGCACAAACCTTCACCTTCAGAGAATTGGCCACTGCTACAAAGAATTTCCGTCAAGAATGTCTCATTGGTGAAGGAGGGTTTGGGAGAGTTTACAAAGGAAAACTCGATAAAACTAATCAGGTTGTAGCAGTGAAGCAGCTTGACAGAAATGGATTGCAAGGGAACAGAGAGTTTCTTGTGGAAGTTTTGATGCTAAGCCTTTTACACCATCAAAACCTTGTCAATCTCATTGGCTATTGTGCAGATGGTGATCAAAGACTCTTGGTCTATGAGTACATGCCTTTAGGATCTCTGGAAGATCATCTACTTGATCTTCCATATGGAAGGAAGGCATTGGATTGGGGAACAAGGATGAAAGTAGGGTTGGGAGCAGCAAAAGGGCTAGAATACTTGCATAACAAAGCCAACCCACCAGTGATATATAGAGACTTGAAATCATCAAACATACTATTGGACGGTGATTACAATGCAAAGCTGTCAGATTTTGGACTTGCAAAGCTTGGTCCTGTTGGAGACAAGTCCCATGTTTCCTCCAGAGTTATGGGAACCTATGGATATTGTGCTCCTGAGTATCAAAGAACTGGTCAACTTACTCTCAAATCTGATGTCTATAGCTTTGGCGTCGTTTTGTTGGAACTCATCACTGGCAAGAGAGTCATCGACAACACTCGTCCAGCTAAACAACAAAACTTGGTCGCTTGGGCATGCCCAATATTCAAGGAACCAGCTAGATTCAAGGAGTTGGCAGATCCTCTTCTTGGTGGAGACTTTCCTATAAGGGCTCTGAACCAAGCGATCGCGGTCGCCGCCATGTGCCTCCATGAGGAAGCGACGACCCGACCTTTGATGTGCGACGTTGTCACTGCTCTCAGCTTCTTAGGAGCAGAAGCCACACAGTCGTCGAGGTCTTCGTCGTTAGGTGATGTCCCATCACCCGTTGATGATTCCAATTTGATGAATCTATCCAAACCCATCGACTATCTTCACAATGACGAAACAGCTGAGGCACGCCAACGAGCGGTCGCCGAGGCCATGGAATGGGGTTCGTCCTCCAAGCAAAATGCTGCAGCTTCGCGCCCGGGAAGTTCTTCTTCCTTGTAA 1395 45.73 MSCFPCFSSHGKAARRTKSGRKERSVSSHSRSHKQQQQQQPPPPQQQHHPAPPPPRPTPTDIPKGNQVQKEAEKEKEKEKEKEKEKENEIIGEKNNIAAQTFTFRELATATKNFRQECLIGEGGFGRVYKGKLDKTNQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPYGRKALDWGTRMKVGLGAAKGLEYLHNKANPPVIYRDLKSSNILLDGDYNAKLSDFGLAKLGPVGDKSHVSSRVMGTYGYCAPEYQRTGQLTLKSDVYSFGVVLLELITGKRVIDNTRPAKQQNLVAWACPIFKEPARFKELADPLLGGDFPIRALNQAIAVAAMCLHEEATTRPLMCDVVTALSFLGAEATQSSRSSSLGDVPSPVDDSNLMNLSKPIDYLHNDETAEARQRAVAEAMEWGSSSKQNAAASRPGSSSSL 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9191008 9194460 - CaPI482276_09g008920.1 Cam09g0892 135221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0892 464 MobiDBLite consensus disorder prediction 445 464 - -
Cam09g0892 464 Coils Coil 65 96 - -
Cam09g0892 464 PANTHER OS07G0668900 PROTEIN 40 400 - -
Cam09g0892 464 FunFam Serine/threonine-protein kinase PBS1 81 190 - -
Cam09g0892 464 SMART serkin_6 114 391 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0892 464 FunFam Serine/threonine-protein kinase PBS1 191 404 - -
Cam09g0892 464 MobiDBLite consensus disorder prediction 430 464 - -
Cam09g0892 464 SUPERFAMILY Protein kinase-like (PK-like) 100 397 IPR011009 -
Cam09g0892 464 Pfam Protein kinase domain 116 385 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0892 464 CDD STKc_IRAK 120 388 - -
Cam09g0892 464 Gene3D Phosphorylase Kinase; domain 1 69 190 - -
Cam09g0892 464 Gene3D Transferase(Phosphotransferase) domain 1 191 406 - -
Cam09g0892 464 MobiDBLite consensus disorder prediction 67 92 - -
Cam09g0892 464 ProSiteProfiles Protein kinase domain profile. 114 391 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0892 464 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524(InterPro)
Cam09g0892 464 SUPERFAMILY beta-sandwich domain of Sec23/24 33 74 - -
Cam09g0892 464 MobiDBLite consensus disorder prediction 43 61 - -
Cam09g0892 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0892 464 MobiDBLite consensus disorder prediction 1 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0892 Cam-Chr9:9191008 Cam10g2032 Cam-Chr10:34163794 1.10E-130 dispersed
Cam09g0887 Cam-Chr9:9124858 Cam09g0892 Cam-Chr9:9191008 1.90E-62 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85434 PF00069 Pkinase 5.00E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0892 - - - 0.0