Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0904 ATGGCGATTCTGAAGCTTTTTTCTCTCTGCATTTTCTTCTTCTTATTGATCAGAGCCCCTGTACGATGTGATTCCTTACATTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGATGTTCAGCTTCTTTTGGGAAAGATCAGAGCTTCACTTGAAGGAGACACTCAAAACTTGCTTTTGTCTTCATGGAATTACTCTCTGCCTCTTTGTCAATGGAGGGGACTCAAATGGGTCTTCTCTACTGGAACTCCACTGGTCTGCAGTGATTCTTCTTCTCCACAGTGGTCTAATCTCACTCTTTTCAAAGACCCTTCTCTTCATGTTCTCTCTTTGCAACTTCCATCTGCTAATCTCACTGGTTCGTTGCCCAAGGAGCTTGGTGAGTTCACTATGCTCCAAAGCCTCTATCTAAGTATAAACTCTTTGACTGGAACCATTCCACTTGAACTTGGTTACAGCTCCTCTCTTTCTGACATTGATTTGAGTAGCAATCTTTTGACTGGAGCTCTTCCACCCTCGATCTGGAATCTGTGTGAGAAACTTGTTTCTGTCAGACTACATGGCAATTCATTATCTGGGTCACTGCCGGAGCCGGCTTTACCAAACTCCACCTGCAAGAATTTGGAAGCTTTGGATTTGGGCAACAATCAGATTTCAGGTACTTTCCCAGAATTCATTACTAGATTTCAGGGTCTGAAAGAGCTTGATCTTGGGAAAAATTTGTTGTCTGGACAAATCCCTCAGAGCTTAGGCCAGTTAGAGCTGGAGAAGTTGAACCTTTCAAACAACAATTTCAGTGGAATATTGCCTGTTTTTAGTAACTCAAAGTTTGGTGTTGAGGCTTTTGAAGGGAATAGTCCTGGGCTTTGTGGGGAGCCTTTGAAAAGCTGTGCAGGACCTTCTCATTTGAGTTCAGGTGCCATTGCTGGCCTTGTTATCGGCTTGATGACTGGGACGGTGGTTTTAGCTTCGTTGCTTATTGGCTATATGCAAAACAAGAAGAAGAAGAGTATGAGTGAGAGTGAAGATGAGATTGACGAAGGAGAAGATGAAGAGAATGGTGGCAGTATCGGTGCAGGCGGTGAAGGAAAGCTCATTTTGTTTCAGGGTGGTGAGCATCTGACATTGGATGATGTCTTGAATGCTACAGGGCAAGTTATGGAAAAAACAAGCTATGGCACTATATATAAGGCGAAGCTTGCTGATGGAGGCACCATTGCTCTGAGATTGCTGAGGGAAGGTAGTTGCAAAGACAGAAATTCTTGTTTGTCTGTGATTAAACAGTTGGGAAAGATTCGCCATGAGAACTTGATTCCTTTGAGAGCTTTCTATCAGGGAAAGAGAGGAGAGAAGCTCCTTATTTATGACTATCTGCCTATCAGAACTTTACATGATTTTCTACATGAATCTAGAGCAGGAAAACCAGTGTTGAACTGGGCTAGGAGGCACAAGATTGCCTTAGGCATCGCCCGGGGACTAGCGCATCTTCACACAGGTCTTGAAGTGCCCATTACACATGGCAACGTTAGATCAAAAAATGTGCTTGTGGATGACTTCTTTGCAGCGAGACTGACGGAGTTTGGGCTCGACAAGCTAATGATCCCATCGGTAGCTGACGAAATCGTCTCGCTTGCAAAATCAGATGGGTACAAGGCACCGGAGCTGCAACGGATGAAGAAATGCAATTCGAGAACAGATGTGTATGCATTTGGAATCTTGCTATTGGAAATTCTGATTGGGAAGAAACCGGGAAAAAGTGGAAGAAATGGAGAGTTTGTGGATCTGCCATCAATCGTGAAAGTGGCAGTTTTAGAGGAAACAACAATGGAGGTTTTCGATGTGGAGGTTTTGAAAGGGATTAGAAGTCCCATGGAAGATGGAATTGTTCAAGCATTGAAGCTTGCAATGGGCTGCTGTGCTCCAGTGGCTTCAGTAAGACCCTCCATGGATGAAGTTGTGAAGCAGTTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTGTACAGCCCAACAGAAACAAGAAGTGAGATTGGTACCCCATTTTGA 2064 43.65 MAILKLFSLCIFFFLLIRAPVRCDSLHFLSSSSSSSSSSSSSSFDVQLLLGKIRASLEGDTQNLLLSSWNYSLPLCQWRGLKWVFSTGTPLVCSDSSSPQWSNLTLFKDPSLHVLSLQLPSANLTGSLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGALPPSIWNLCEKLVSVRLHGNSLSGSLPEPALPNSTCKNLEALDLGNNQISGTFPEFITRFQGLKELDLGKNLLSGQIPQSLGQLELEKLNLSNNNFSGILPVFSNSKFGVEAFEGNSPGLCGEPLKSCAGPSHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKKSMSESEDEIDEGEDEENGGSIGAGGEGKLILFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPIRTLHDFLHESRAGKPVLNWARRHKIALGIARGLAHLHTGLEVPITHGNVRSKNVLVDDFFAARLTEFGLDKLMIPSVADEIVSLAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDVEVLKGIRSPMEDGIVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9316202 9318752 - CaPI482276_09g009040.1 Cam09g0904 135233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0904 687 Gene3D Phosphorylase Kinase; domain 1 372 463 - -
Cam09g0904 687 FunFam Leucine-rich repeat receptor-like protein kinase 211 303 - -
Cam09g0904 687 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 106 201 - -
Cam09g0904 687 SUPERFAMILY Protein kinase-like (PK-like) 392 663 IPR011009 -
Cam09g0904 687 SUPERFAMILY L domain-like 59 278 - -
Cam09g0904 687 Gene3D Transferase(Phosphotransferase) domain 1 465 680 - -
Cam09g0904 687 Pfam Leucine Rich Repeat 138 157 IPR001611 GO:0005515(InterPro)
Cam09g0904 687 Pfam Leucine Rich Repeat 161 183 IPR001611 GO:0005515(InterPro)
Cam09g0904 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 116 669 IPR052451 -
Cam09g0904 687 Coils Coil 337 357 - -
Cam09g0904 687 Gene3D Ribonuclease Inhibitor 206 304 IPR032675 -
Cam09g0904 687 Gene3D Ribonuclease Inhibitor 45 205 IPR032675 -
Cam09g0904 687 MobiDBLite consensus disorder prediction 667 687 - -
Cam09g0904 687 MobiDBLite consensus disorder prediction 343 364 - -
Cam09g0904 687 ProSiteProfiles Protein kinase domain profile. 387 687 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0904 687 Pfam Leucine rich repeat 213 271 IPR001611 GO:0005515(InterPro)
Cam09g0904 687 MobiDBLite consensus disorder prediction 668 687 - -
Cam09g0904 687 Pfam Protein tyrosine and serine/threonine kinase 391 662 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0475 Cam-Chr1:5073987 Cam09g0904 Cam-Chr9:9316202 1.80E-44 dispersed
Cam07g1707 Cam-Chr7:31797385 Cam09g0904 Cam-Chr9:9316202 5.00E-59 dispersed
Cam09g0904 Cam-Chr9:9316202 Cam10g1909 Cam-Chr10:33160136 1.40E-57 dispersed
Cam09g0904 Cam-Chr9:9316202 Cam10g2202 Cam-Chr10:35427424 1.10E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85435 PF07714 PK_Tyr_Ser-Thr 2.90E-25 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0904 - - - 0.0