Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0954 ATGTCAACACTGAGCCAGAGCAGCTCCCTCAACAGTTGCACTAAGTTTCCCCACCCTCCCCATGACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCCAAACGCGCCCAATGGCTACGCGCCGCGGTCCTCGGTGCCAACGATGGCCTCGTCTCTACGGCATCTCTCATGATGGGCGTCGGTGCCGTCAAGCACGACGTCAAGGCCATGATCCTCACCGGCTTTGCTGGCCTCATTGCCGGTGCCTGCAGCATGGCCATCGGTGAGTTCGTTTCTGTCTACTCTCAATTGGATATAGAAATGGCGCATATAGAAAGAAACAAGGATCATAGGAAGGAGTTGGAGGAAGAGGAGAGAGAGAAACTACCAAACCCTCTTCAGGCGGCAGCGGCTTCGGCCTTGGCCTTTTCCACGGGGGCAATAGTGCCACTGTTGGCCGCAGCGTTTATAAGGCAGTATAGGCTCCGGCTCGGGGTGGTGGTGGTGGCAGTCACAGTGGCGCTGGTAGGGTTCGGTTGGCTGGGTGCAGCATTAGGGAAGGCGCCAACCATCAGGTCCATAGTGAGGGTCTTGATTGGTGGGTGGGCAGCCATGGCTGTAACTTTTGGATTGACTAAGTTGATTGCATCGAGTGGATTATGA 651 54.99 MSTLSQSSSLNSCTKFPHPPHDHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIERNKDHRKELEEEEREKLPNPLQAAAASALAFSTGAIVPLLAAAFIRQYRLRLGVVVVAVTVALVGFGWLGAALGKAPTIRSIVRVLIGGWAAMAVTFGLTKLIASSGL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9826020 9826670 - CaPI482276_09g009540.1 Cam09g0954 135283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0954 216 Coils Coil 103 123 - -
Cam09g0954 216 MobiDBLite consensus disorder prediction 1 15 - -
Cam09g0954 216 MobiDBLite consensus disorder prediction 1 22 - -
Cam09g0954 216 Pfam VIT family 116 208 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cam09g0954 216 Pfam VIT family 42 125 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cam09g0954 216 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 19 212 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1134 Cam-Chr8:17679820 Cam09g0954 Cam-Chr9:9826020 6.20E-73 dispersed
Cam09g0954 Cam-Chr9:9826020 Cam09g1481 Cam-Chr9:23942581 1.40E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0954 K22736 - csv:101210510 363.614