Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0961 ATGTCGTTAGTTAGGCCATCTGATCCATCTCCATTATCATATGGAAGTCGCAAGCTTTACTCGTTGAAGGGAACAAATAATGCTCCTGACTTATCCACACAAAGATTTGGCTCTGAAAAACATAGAACGATGTATATGAATGATACATATTGCAGTGAGAGCTATGAGAAGTATTTCCTCGACTTCCCGATAGAAGAGCCATCGATTTCAGGAATTTCTACCAATTCTTGTCACCCGAACGCTTGGGTTGATTCTCTATCCCCCTTGTGCGATTCATTTACACTTTTTGATGCTTGTCAATCAAATTCAGACTCAGCTTGCCTCGAGAGTACAAGTCCAGACCAACTTGATTTTGAGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGAGATCTGCTGGGTGACCCGGATGCTGCAGATTACGATGTTGAGATGCTTGCTAACGGCCAGAGCATGGAAATTGATAGCGAATGGGCAAATTCGATTCAAGATGCACTACTTCATGACTCACCAAAGGAATCTTCGTCGACAGATTCTAATTTCAGTACCATCAGCAGCAATAAGGATGCATCTCAGATATCTTCACAGAATCCCAGACAAATGCTTTTAGAATGTGCTTTTGCTATCTCAGAGGAGAACTTCGAAGAAGCGAGAGCCATGATAGAACAGCTCCGAGGTATGGTCTCTGTTCAGGGAGATCCCTCACAGAGGATTGCTGCATATATGGTGGAAGGTCTTGCGGCTCGGTTGTTGGAATCAGGAAAATGTCTTTATAAAGCTTTGAGATGCAAGGAACCACCTTCCTCCGACCGTCTTGCAGCTATGCAAATCCTTTTCGAGGTCTGCCCGTGTTTCAAATTTGGCTTTATGGCTGCAAATTGTGCCATTATTGAGGCAGCGAAAGATGAGAAGAAAATTCACATAATCGATTTTGATGTAAGCCAAGGAACTCAGTACATAAAATTGATTCAGATGCTAGCAGCTCAGCCAGGTAAGCCACCACACTTGAGGTTAACAGGGGTTGACGACCCCGAATCGGTACAGCGCCCCGTTGGAGGTCTTAGGCACATTGGACAAAGACTCGAGCAACTAGCAAAAGCACTGCGGGTTCCATTTGAATTTCGAGCGATTCCCTCAAATGCTTCTGATGTTACTCCCTCAATGCTCGCCTCCCGGCCTGGAGAAGCACTCATAGTGAACTTTGCTTTCTTGCTTCACCACATGCCAGATGAAAGCGTTTCAACCGTAAATCTACGAGACAGGCTTCTCCGTATGGTCAAGAGCTTGAACCCGAAACTAGTAACAGTCGTCGAACAGGACATGAACACAAACACCACCCCATTCTTTTCAAGATTTGTCGAAGCCTATAACTACTACGCAGCTGTTTACAATTCCCTTGATGCAACACTCCCAAGAGATAGTCAAGACAGAATAAATGTAGAAAGGCAATGTTTGGCAAAGGACATAGTCAACATTGTAGCTTGTGAAGGTGAGGAAAGAGTAGAGAGATACGAAGTAGCCGGGAAATGGCGGGCAAGAATGACGATGGCAGGCTTCACTTCCTGTTCAATGAGCAAAAATGTGACCGACCCGATTCGCAAACTGATCGAGGAGTATTGTGACAGATTCAAGATGTATGAGGAAATGGGCACACTTCATTTTGGATGGGAAGAGAAAAGCTTGGTTGTTACTTCGGCATGGAGGTAA 1713 44.54 MSLVRPSDPSPLSYGSRKLYSLKGTNNAPDLSTQRFGSEKHRTMYMNDTYCSESYEKYFLDFPIEEPSISGISTNSCHPNAWVDSLSPLCDSFTLFDACQSNSDSACLESTSPDQLDFEDDQVRLKLQELERDLLGDPDAADYDVEMLANGQSMEIDSEWANSIQDALLHDSPKESSSTDSNFSTISSNKDASQISSQNPRQMLLECAFAISEENFEEARAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKKIHIIDFDVSQGTQYIKLIQMLAAQPGKPPHLRLTGVDDPESVQRPVGGLRHIGQRLEQLAKALRVPFEFRAIPSNASDVTPSMLASRPGEALIVNFAFLLHHMPDESVSTVNLRDRLLRMVKSLNPKLVTVVEQDMNTNTTPFFSRFVEAYNYYAAVYNSLDATLPRDSQDRINVERQCLAKDIVNIVACEGEERVERYEVAGKWRARMTMAGFTSCSMSKNVTDPIRKLIEEYCDRFKMYEEMGTLHFGWEEKSLVVTSAWR 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9939946 9941658 + CaPI482276_09g009610.1 Cam09g0961 135290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0961 570 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 184 569 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cam09g0961 570 MobiDBLite consensus disorder prediction 171 198 - -
Cam09g0961 570 ProSiteProfiles GRAS family profile. 191 570 IPR005202 -
Cam09g0961 570 Pfam GRAS domain family 201 570 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0098 Cam-Chr1:1266332 Cam09g0961 Cam-Chr9:9939946 1.30E-72 dispersed
Cam02g2074 Cam-Chr2:33644658 Cam09g0961 Cam-Chr9:9939946 5.90E-57 dispersed
Cam09g0961 Cam-Chr9:9939946 Cam10g0430 Cam-Chr10:6656386 1.60E-112 dispersed
Cam09g0961 Cam-Chr9:9939946 Cam03g0134 Cam-Chr3:2246993 2.20E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52584 PF03514 GRAS 1.20E-130 CL0063 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0961 K27748 - csv:101206511 1080.47