Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1020 ATGATAAAGCAAGCGCACTCGTTGATTCAAATTGCCAACGAAACCCAATTCAACGGATTCAAAAGCATTGGCAGAGTCAGATTCTGTTTGTCGATCCTTCAATCCTCCGCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGCAACCACCATCGCCGGCCTCCCATGGCCGCCTCCGCCGCCGCCGCGGATAACCCATCATCCACCTCTTCATCCTCCTCCAACCCTTTCATTTTCTCCCCCGATCCTCCCCCTAGACTTCCTCTCACACCCCATCAGATTAAGCTTTGTTCCGAAGCTCTTGAGGCCTTCAGGGAGAAGCTTCAGATGCCTGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCAAGAGAATAACAGTATCTGATATGAAGAGAAGTTGCTCTGTGGCACTTGACAATGTCAACATAAATAAAAATCGTTACACGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGCAAGGATTACAGACCTTCCGCGAGGGGTTATATCAATGCAAGCTTTATTTCGACTTCCTCCTCAAAAAGCCTTTCTAAGTTTATTGCTACACAAGGTCCATTGCCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCAGAAGATGGTCCTAGAGATTTTGGTAATCTAATTGTTATCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGAACCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGCTGAAGAGGCTGTATCATTTACCTCCCGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGAGACATGTCTGCTTTAGATCTTGTCAATACCATTGCGACATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGACTGATGACCGACCTCAGTCGGGACCTCGCTGTATTAGATGTATAAAAGAGTTTGCTGGATTTTACTTCTCAGCGTTGATGAAATCAGCAGCTGTGCTTCCAGGAAGTTCGTTTTCTTGA 1242 45.09 MIKQAHSLIQIANETQFNGFKSIGRVRFCLSILQSSAFQIRPLGNLTSTRSRNHHRRPPMAASAAAADNPSSTSSSSSNPFIFSPDPPPRLPLTPHQIKLCSEALEAFREKLQMPDVINQEFARLQAKRITVSDMKRSCSVALDNVNINKNRYTDVLPFDETRVVLDSCKDYRPSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLIVISKWIKSSNSSLILRHLEVNHKESEESVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLVNTIATFRSQRIGMVQTLTDDRPQSGPRCIRCIKEFAGFYFSALMKSAAVLPGSSFS 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10612149 10618118 + CaPI482276_09g010200.1 Cam09g1020 135349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1020 413 Gene3D Protein tyrosine phosphatase superfamily 96 376 IPR029021 -
Cam09g1020 413 FunFam Tyrosine-protein phosphatase non-receptor type 12 95 377 - -
Cam09g1020 413 SMART ptp_7 284 391 IPR003595 -
Cam09g1020 413 SMART PTPc_3 117 394 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cam09g1020 413 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 94 374 IPR029021 -
Cam09g1020 413 ProSitePatterns Tyrosine specific protein phosphatases active site. 324 334 IPR016130 GO:0016311(InterPro)
Cam09g1020 413 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 303 378 IPR000387 GO:0016311(InterPro)
Cam09g1020 413 Pfam Protein-tyrosine phosphatase 147 375 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cam09g1020 413 ProSiteProfiles PTP type protein phosphatase domain profile. 118 373 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cam09g1020 413 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 57 374 IPR050348 GO:0004725(PANTHER)
Cam09g1020 413 MobiDBLite consensus disorder prediction 46 88 - -
Cam09g1020 413 PRINTS Protein tyrosine phosphatase signature 196 216 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cam09g1020 413 PRINTS Protein tyrosine phosphatase signature 321 339 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cam09g1020 413 PRINTS Protein tyrosine phosphatase signature 283 300 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cam09g1020 413 PRINTS Protein tyrosine phosphatase signature 178 185 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cam09g1020 413 PRINTS Protein tyrosine phosphatase signature 354 369 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cam09g1020 413 MobiDBLite consensus disorder prediction 66 81 - -
Cam09g1020 413 CDD PTPc_plant_PTP1 179 373 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1020 - - - 0.0