Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1057 ATGAGTTGGTTTCAATGTTGCATGTCAGAGGAGAGAGTTAATAGAAATGCTTTGAAAAAGAGCATTAAGGAATACCATGACACAAAAACTTTAGCCTCATTTGCCAATCTTTCCTTCAAGTCTGGTAACAATAGAGGAAGGTACACAAATAAGGAGTTAAAGAGGTTACGAAAAGGGAACATTTTAGCTCAAACTTTTACATTCCGTGAGCTATGTGTTGCAACAAATAACTTCAACAACAAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGCCCTCATTGAAAGCACAAAACAAGTAACGGCCGTGAAGCGACTTGATCCAAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTCAATTTGGTTGGGTATTGTGCTGATGCAAATCAAAGGATTTTGGTTTATGAGTATATGGCTAATGGTTCCTTGGAGGATCATCTTCTTGATACAGCTTCAAATAAGCCACCTCTAGATTGGAACACAAGGATGAAAATCGTCAAAGGAATCGCAAGAGGACTCGAATACTTACACGAAACCGTCAGTCCTCCCGTGATATACCGCGACTTTAAAGCTTCAAACATATTGTTGGATGAAGAATTCAATGCAAAGCTCTCTGATTTTGGTCTTGCAAAGATAGGTCCCATTGGAGATCAATCTCATGTTTCCACAAGAGTGATGGGAACTTATGGTTATTGTGCTCCTGAATATGCACTTACAGGACAATTGTCCACCAAATCCGATGTCTACGGTTTCGGCGTCGTCTTCTTGGAGATAATCACAGGAAGACGAGTTATTGACAACACAAAACCAACTGCACAAAAAAATTTAATTTCTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTCACACTAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTCTTTATCAAGCTCTAGCAGTGGTAGCCATGTGTTTGCAAGAGGAAGCAAATACTCGGCCATTGATTAGCGACGTGGTTACAGCGCTTCAATATTTAGCTGTGAGTGACAAGAATGTCGATGAAGACGTAGATGACGAATCAGATTCGGAGTCGGTATCTGAATCGGAATTAAGTTGTTCATATTCATGTTCAACTTCTCCTGATAGAAGAAGTGATATTGGAGGTAAAAATGTTGGTGTTGAAGGTGATGGGAGAGGAGAGTGGGCACGAATCACCACCCGTGGATTCCCATTCATTCTACCCAACTCCCATGTTCTTCAGATTCAATTCCCTTTCTTAATCGCCATGAAAAGACGGACTTTGCTCAAGGTCATCGTTCTCGGTGATAGTGGGGTTGGTAAGACGTCGTTGATGAACCAGTATCCTTCTGAAAATTGGTTGTTGACAATGATATTGATCTGTGTTTTGAGCATATACGTGCATAAGAAGTTCAGCCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGATAGGCTTGTCACACTTCAAATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATACTTGGCACGATGAGTTTCTTAGACAGGTAAATCCGTTCAGTTCTTTGAGTTTTCTTGCTTTTTGTGATGTTGTGTTGGCTGTTGAGCTTGCTTATTATTACTCTGTTACTAGGATCTTTTACAGCTTGTCTGAGGAAAAATTATCAGCACATTTTTTCTACAGTAATGGTTTCAGAGGAAGGGAAGGGGCTTTTTGGGTTGTACCCTGCATCCTCATTTTTTCCTTCTCATTCAAAAAGTGTTGTTTTATTTGCGTTGCTCTGGCAAACCCACCTGACCCTAGGACGTTTCCGTTTATTTTGCTTGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCCTACTTCGAGACATCAGCTAAAGAGGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGTGCATGCTGA 2217 40.87 MSWFQCCMSEERVNRNALKKSIKEYHDTKTLASFANLSFKSGNNRGRYTNKELKRLRKGNILAQTFTFRELCVATNNFNNKNLLGEGGFGRVYKALIESTKQVTAVKRLDPNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADANQRILVYEYMANGSLEDHLLDTASNKPPLDWNTRMKIVKGIARGLEYLHETVSPPVIYRDFKASNILLDEEFNAKLSDFGLAKIGPIGDQSHVSTRVMGTYGYCAPEYALTGQLSTKSDVYGFGVVFLEIITGRRVIDNTKPTAQKNLISWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVTALQYLAVSDKNVDEDVDDESDSESVSESELSCSYSCSTSPDRRSDIGGKNVGVEGDGRGEWARITTRGFPFILPNSHVLQIQFPFLIAMKRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLTMILICVLSIYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDTWHDEFLRQVNPFSSLSFLAFCDVVLAVELAYYYSVTRIFYSLSEEKLSAHFFYSNGFRGREGAFWVVPCILIFSFSFKKCCFICVALANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10932702 10945619 - CaPI482276_09g010570.1 Cam09g1057 135386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1057 738 MobiDBLite consensus disorder prediction 376 394 - -
Cam09g1057 738 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1057 738 ProSiteProfiles small GTPase Rab1 family profile. 440 738 - -
Cam09g1057 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 716 IPR027417 -
Cam09g1057 738 Gene3D Transferase(Phosphotransferase) domain 1 155 380 - -
Cam09g1057 738 SUPERFAMILY Protein kinase-like (PK-like) 63 350 IPR011009 -
Cam09g1057 738 PRINTS Transforming protein P21 ras signature 486 502 - -
Cam09g1057 738 PRINTS Transforming protein P21 ras signature 445 466 - -
Cam09g1057 738 PRINTS Transforming protein P21 ras signature 504 526 - -
Cam09g1057 738 PANTHER OS07G0668900 PROTEIN 37 374 - -
Cam09g1057 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1057 738 ProSiteProfiles small GTPase Rho family profile. 437 714 - -
Cam09g1057 738 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524(InterPro)
Cam09g1057 738 FunFam Serine/threonine-protein kinase PBS1 155 371 - -
Cam09g1057 738 Gene3D - 438 582 IPR027417 -
Cam09g1057 738 Pfam Ras family 477 565 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Cam09g1057 738 Pfam Ras family 647 709 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Cam09g1057 738 SMART rho_sub_3 447 712 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Cam09g1057 738 ProSiteProfiles small GTPase Ras family profile. 439 738 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Cam09g1057 738 Gene3D - 599 723 IPR027417 -
Cam09g1057 738 SMART rab_sub_5 445 712 - -
Cam09g1057 738 CDD STKc_IRAK 84 353 - -
Cam09g1057 738 Pfam Protein kinase domain 79 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1057 738 Gene3D Phosphorylase Kinase; domain 1 40 154 - -
Cam09g1057 738 MobiDBLite consensus disorder prediction 363 400 - -
Cam09g1057 738 CDD Rab7 445 715 - -
Cam09g1057 738 SMART ras_sub_4 442 712 - -
Cam09g1057 738 FunFam probable serine/threonine-protein kinase RLCKVII 50 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0199 Cam-Chr9:2703777 Cam09g1057 Cam-Chr9:10932702 3.70E-75 dispersed
Cam09g1057 Cam-Chr9:10932702 Cam10g0512 Cam-Chr10:7600385 1.10E-174 dispersed
Cam11g1798 Cam-Chr11:30512776 Cam09g1057 Cam-Chr9:10932702 4.70E-20 dispersed
Cam11g1862 Cam-Chr11:31189357 Cam09g1057 Cam-Chr9:10932702 2.60E-66 dispersed
Cam09g1057 Cam-Chr9:10932702 Cam05g0685 Cam-Chr5:5961838 6.60E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85439 PF00069 Pkinase 2.80E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1057 - - - 0.0