Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g1057 | ATGAGTTGGTTTCAATGTTGCATGTCAGAGGAGAGAGTTAATAGAAATGCTTTGAAAAAGAGCATTAAGGAATACCATGACACAAAAACTTTAGCCTCATTTGCCAATCTTTCCTTCAAGTCTGGTAACAATAGAGGAAGGTACACAAATAAGGAGTTAAAGAGGTTACGAAAAGGGAACATTTTAGCTCAAACTTTTACATTCCGTGAGCTATGTGTTGCAACAAATAACTTCAACAACAAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGCCCTCATTGAAAGCACAAAACAAGTAACGGCCGTGAAGCGACTTGATCCAAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTCAATTTGGTTGGGTATTGTGCTGATGCAAATCAAAGGATTTTGGTTTATGAGTATATGGCTAATGGTTCCTTGGAGGATCATCTTCTTGATACAGCTTCAAATAAGCCACCTCTAGATTGGAACACAAGGATGAAAATCGTCAAAGGAATCGCAAGAGGACTCGAATACTTACACGAAACCGTCAGTCCTCCCGTGATATACCGCGACTTTAAAGCTTCAAACATATTGTTGGATGAAGAATTCAATGCAAAGCTCTCTGATTTTGGTCTTGCAAAGATAGGTCCCATTGGAGATCAATCTCATGTTTCCACAAGAGTGATGGGAACTTATGGTTATTGTGCTCCTGAATATGCACTTACAGGACAATTGTCCACCAAATCCGATGTCTACGGTTTCGGCGTCGTCTTCTTGGAGATAATCACAGGAAGACGAGTTATTGACAACACAAAACCAACTGCACAAAAAAATTTAATTTCTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTCACACTAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTCTTTATCAAGCTCTAGCAGTGGTAGCCATGTGTTTGCAAGAGGAAGCAAATACTCGGCCATTGATTAGCGACGTGGTTACAGCGCTTCAATATTTAGCTGTGAGTGACAAGAATGTCGATGAAGACGTAGATGACGAATCAGATTCGGAGTCGGTATCTGAATCGGAATTAAGTTGTTCATATTCATGTTCAACTTCTCCTGATAGAAGAAGTGATATTGGAGGTAAAAATGTTGGTGTTGAAGGTGATGGGAGAGGAGAGTGGGCACGAATCACCACCCGTGGATTCCCATTCATTCTACCCAACTCCCATGTTCTTCAGATTCAATTCCCTTTCTTAATCGCCATGAAAAGACGGACTTTGCTCAAGGTCATCGTTCTCGGTGATAGTGGGGTTGGTAAGACGTCGTTGATGAACCAGTATCCTTCTGAAAATTGGTTGTTGACAATGATATTGATCTGTGTTTTGAGCATATACGTGCATAAGAAGTTCAGCCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGATAGGCTTGTCACACTTCAAATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATACTTGGCACGATGAGTTTCTTAGACAGGTAAATCCGTTCAGTTCTTTGAGTTTTCTTGCTTTTTGTGATGTTGTGTTGGCTGTTGAGCTTGCTTATTATTACTCTGTTACTAGGATCTTTTACAGCTTGTCTGAGGAAAAATTATCAGCACATTTTTTCTACAGTAATGGTTTCAGAGGAAGGGAAGGGGCTTTTTGGGTTGTACCCTGCATCCTCATTTTTTCCTTCTCATTCAAAAAGTGTTGTTTTATTTGCGTTGCTCTGGCAAACCCACCTGACCCTAGGACGTTTCCGTTTATTTTGCTTGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCCTACTTCGAGACATCAGCTAAAGAGGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGTGCATGCTGA | 2217 | 40.87 | MSWFQCCMSEERVNRNALKKSIKEYHDTKTLASFANLSFKSGNNRGRYTNKELKRLRKGNILAQTFTFRELCVATNNFNNKNLLGEGGFGRVYKALIESTKQVTAVKRLDPNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADANQRILVYEYMANGSLEDHLLDTASNKPPLDWNTRMKIVKGIARGLEYLHETVSPPVIYRDFKASNILLDEEFNAKLSDFGLAKIGPIGDQSHVSTRVMGTYGYCAPEYALTGQLSTKSDVYGFGVVFLEIITGRRVIDNTKPTAQKNLISWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVTALQYLAVSDKNVDEDVDDESDSESVSESELSCSYSCSTSPDRRSDIGGKNVGVEGDGRGEWARITTRGFPFILPNSHVLQIQFPFLIAMKRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLTMILICVLSIYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDTWHDEFLRQVNPFSSLSFLAFCDVVLAVELAYYYSVTRIFYSLSEEKLSAHFFYSNGFRGREGAFWVVPCILIFSFSFKKCCFICVALANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC | 738 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10932702 | 10945619 | - | CaPI482276_09g010570.1 | Cam09g1057 | 135386 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g1057 | 738 | MobiDBLite | consensus disorder prediction | 376 | 394 | - | - | |
Cam09g1057 | 738 | ProSiteProfiles | Protein kinase domain profile. | 78 | 355 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam09g1057 | 738 | ProSiteProfiles | small GTPase Rab1 family profile. | 440 | 738 | - | - | |
Cam09g1057 | 738 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 439 | 716 | IPR027417 | - | |
Cam09g1057 | 738 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 380 | - | - | |
Cam09g1057 | 738 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 350 | IPR011009 | - | |
Cam09g1057 | 738 | PRINTS | Transforming protein P21 ras signature | 486 | 502 | - | - | |
Cam09g1057 | 738 | PRINTS | Transforming protein P21 ras signature | 445 | 466 | - | - | |
Cam09g1057 | 738 | PRINTS | Transforming protein P21 ras signature | 504 | 526 | - | - | |
Cam09g1057 | 738 | PANTHER | OS07G0668900 PROTEIN | 37 | 374 | - | - | |
Cam09g1057 | 738 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 201 | 213 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam09g1057 | 738 | ProSiteProfiles | small GTPase Rho family profile. | 437 | 714 | - | - | |
Cam09g1057 | 738 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 107 | IPR017441 | GO:0005524(InterPro) | |
Cam09g1057 | 738 | FunFam | Serine/threonine-protein kinase PBS1 | 155 | 371 | - | - | |
Cam09g1057 | 738 | Gene3D | - | 438 | 582 | IPR027417 | - | |
Cam09g1057 | 738 | Pfam | Ras family | 477 | 565 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cam09g1057 | 738 | Pfam | Ras family | 647 | 709 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cam09g1057 | 738 | SMART | rho_sub_3 | 447 | 712 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cam09g1057 | 738 | ProSiteProfiles | small GTPase Ras family profile. | 439 | 738 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cam09g1057 | 738 | Gene3D | - | 599 | 723 | IPR027417 | - | |
Cam09g1057 | 738 | SMART | rab_sub_5 | 445 | 712 | - | - | |
Cam09g1057 | 738 | CDD | STKc_IRAK | 84 | 353 | - | - | |
Cam09g1057 | 738 | Pfam | Protein kinase domain | 79 | 349 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam09g1057 | 738 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 154 | - | - | |
Cam09g1057 | 738 | MobiDBLite | consensus disorder prediction | 363 | 400 | - | - | |
Cam09g1057 | 738 | CDD | Rab7 | 445 | 715 | - | - | |
Cam09g1057 | 738 | SMART | ras_sub_4 | 442 | 712 | - | - | |
Cam09g1057 | 738 | FunFam | probable serine/threonine-protein kinase RLCKVII | 50 | 154 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam09g0199 | Cam-Chr9:2703777 | Cam09g1057 | Cam-Chr9:10932702 | 3.70E-75 | dispersed | |
Cam09g1057 | Cam-Chr9:10932702 | Cam10g0512 | Cam-Chr10:7600385 | 1.10E-174 | dispersed | |
Cam11g1798 | Cam-Chr11:30512776 | Cam09g1057 | Cam-Chr9:10932702 | 4.70E-20 | dispersed | |
Cam11g1862 | Cam-Chr11:31189357 | Cam09g1057 | Cam-Chr9:10932702 | 2.60E-66 | dispersed | |
Cam09g1057 | Cam-Chr9:10932702 | Cam05g0685 | Cam-Chr5:5961838 | 6.60E-130 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85439 | PF00069 | Pkinase | 2.80E-46 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g1057 | - | - | - | 0.0 |