Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1068 ATGGTGAAAAGCTTACAAGGCGGAGGGCAAAACCTCCCGGCGGACGTGACGCAGGTGATTGATCAATTGGAGCGCCACTGCTTGGCTCCCGATGGATCTCTCGTCTCCAAGCCGGCCCACTACGATCTGCAGCTCGCGAGAGAAGAAATGTCGAGGGAAAGATTGCGTTATTTGGAAGCCATGGCAATCTATTGTGAAGCAATTGCAATGGTGGAAGAGTACCAACAGGCTGTTTCAATGGCGAACCTTGGAGGAGTTCGAGACGTTCACGCTCTTTATCCACAACTAGGCTTGAAGAATTCGCCTCAGGTTTATGAGACCCTTGAGCACCGAATGGTTGTGGCAGAAGCATCTCAAAGATTGAGGCTTCCTCTTATATCAAAGGACGGTGAAATCCAGGAGGAAGAGATTGAGAAGTTGAGTTTAGTATCTCGAAGTTCCCTTGATAGTACAAGCACGGGTGTAACAATCAGCTCAAGTGCTAATTCAACAAATTATACAAGTGCTAGCAGTACCGGAAGCATTGTGAACAATAGTCTTTCAGTAAGCTCAACTGAAACTGCAGAACCTGGAGTTGGTGGTGTTCCCAATCGCTTTCTTGGAATCACACCTGCCTTTTTATGGCAAACACAGCTCCATCAAACGCCTTCCATGGATATGGCCGAATATCAAATGGCTCTTTCCCGCGAGATTGATGCTCGTTTGAAGACTAAATGTGATAAAGTAGCTGATGCTTTTGTGATGGATGATATTGAGTCATCATCTGGGCATCATAGCTCTAGTGCTCGGCTTCCAGAGAGAGTCAAGTTGATCATTGAGGAAATTGAAAGGGAAGAAGCAGCTTTACGGCAAGAGCTTTACTCGGTAGACAGAAAGTTTGCTGAATATTACAATGTTCTTGAGCAGATATTGGGAGTACTAATTAAGCTTGTCAAAGATTTGAAGCTGCAGCATCAACATAAATATGACGATCTCCAGAAAACATGGCTGTGTAAAAGGTGTGAGACCATGAATGCGAAACTGAGCGTTTTAGAGCACGTTCTCCTGCTTGAAACTTACACTCAGGAATCTATACCAGCCCTTCATAAAATAAGAAAATATCTTGTTGAAGCTACGGAGGAAGCTTCTATTTCTTATAACAAAGCAGTTACTCGTCTCCGCGAGTATCAAGGCGTAGACCCTCATTTCGACACAATTGCGAGGCAGTACCATGATATTGTGATGAAACTTGAGAATATGCAATGGACAATTCACCAAGTTGAGATGGACTTGAAACGCTTGCCAGATCAGTCAAATTCCAGCTCAATCCAACGGACTGTTGCCGCCTTCCTCAAAAATCTCTATAAATACTTCCCGTTCCCTCTCACAATCATTTCATCCTTCCTTCTTTCCTCTCTTTTCACGCGTTCTTCGTTCTTTCGCCTTCTGATTTTCAGCCGTCCGGTTTCGTTTGAGCTTTCATCCAAACAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATTCGCGTCCAGCAAAGGAATGGGAAGAAGTGCTTGACTACAGTCCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA 1758 44.25 MVKSLQGGGQNLPADVTQVIDQLERHCLAPDGSLVSKPAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEEYQQAVSMANLGGVRDVHALYPQLGLKNSPQVYETLEHRMVVAEASQRLRLPLISKDGEIQEEEIEKLSLVSRSSLDSTSTGVTISSSANSTNYTSASSTGSIVNNSLSVSSTETAEPGVGGVPNRFLGITPAFLWQTQLHQTPSMDMAEYQMALSREIDARLKTKCDKVADAFVMDDIESSSGHHSSSARLPERVKLIIEEIEREEAALRQELYSVDRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDDLQKTWLCKRCETMNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSNSSSIQRTVAAFLKNLYKYFPFPLTIISSFLLSSLFTRSSFFRLLIFSRPVSFELSSKQAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11028201 11036938 - CaPI482276_09g010680.1 Cam09g1068 135397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1068 585 Gene3D - 479 585 - -
Cam09g1068 585 ProSiteProfiles Translation initiation factor SUI1 family profile. 503 573 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam09g1068 585 FunFam Eukaryotic translation initiation factor SUI1 477 585 - -
Cam09g1068 585 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 5 425 IPR029327 GO:0051011(PANTHER)|GO:0051225(PANTHER)|GO:0051225(InterPro)|GO:0070652(PANTHER)|GO:0070652(InterPro)
Cam09g1068 585 Pfam Translation initiation factor SUI1 500 573 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam09g1068 585 Coils Coil 272 292 - -
Cam09g1068 585 CDD eIF1_SUI1 501 584 IPR005874 GO:0003743(InterPro)
Cam09g1068 585 MobiDBLite consensus disorder prediction 151 171 - -
Cam09g1068 585 Pfam HAUS augmin-like complex subunit 4 188 422 IPR029327 GO:0051225(InterPro)|GO:0070652(InterPro)
Cam09g1068 585 SUPERFAMILY eIF1-like 494 585 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam09g1068 585 NCBIfam translation initiation factor SUI1 490 585 IPR005874 GO:0003743(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1068 Cam-Chr9:11028201 Cam10g0497 Cam-Chr10:7439529 5.50E-47 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1068 K16587 - csv:101203307 784.252