Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1098 ATGACAATCGACCACCACTCCGATCAAACCACCGATGATGATTCCCACCATCTCCATCCTACTCTTCCCACGCCAGTTGTCGCCAATGGCACCGACTGCGAGAATGCCGGAGATGACCTCTTCGTCCCTCCCCTGAACTTCGCTGTCGTTGACAACGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTCTTGCAGACGTTAGGCCTTCGTTCGATTATATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGCTGGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATATGAGCGCTGATCAAATGTACTATTTGGAGCCTTTTGTGAACATTCCAGACTACACGATTCGTGAAGTACTTAAAGTTATTCTTGATGTGAGGAATCGCCCAGTTTTAATCCATTGCAAGCGAGGGAAGCACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTTGACATTTCTGGCTTGAAGCATTTGCCACCATCATTTTCTTGTTCCGAAAGGTAA 702 46.44 MTIDHHSDQTTDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11462246 11464835 + CaPI482276_09g010980.1 Cam09g1098 135427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1098 233 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 230 IPR020422 GO:0006470(InterPro)
Cam09g1098 233 Pfam Tyrosine phosphatase family 42 221 IPR004861 -
Cam09g1098 233 Gene3D Protein tyrosine phosphatase superfamily 40 220 IPR029021 -
Cam09g1098 233 PRINTS Plant and fungal dual specificity phosphatase signature 41 58 IPR020428 GO:0016791(InterPro)
Cam09g1098 233 PRINTS Plant and fungal dual specificity phosphatase signature 78 91 IPR020428 GO:0016791(InterPro)
Cam09g1098 233 PRINTS Plant and fungal dual specificity phosphatase signature 97 111 IPR020428 GO:0016791(InterPro)
Cam09g1098 233 PRINTS Plant and fungal dual specificity phosphatase signature 144 158 IPR020428 GO:0016791(InterPro)
Cam09g1098 233 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 41 218 IPR029021 -
Cam09g1098 233 MobiDBLite consensus disorder prediction 1 23 - -
Cam09g1098 233 PANTHER TYROSINE-PROTEIN PHOSPHATASE 24 227 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Cam09g1098 233 CDD PFA-DSP_Siw14 40 217 - -
Cam09g1098 233 MobiDBLite consensus disorder prediction 1 19 - -
Cam09g1098 233 ProSitePatterns Tyrosine specific protein phosphatases active site. 166 176 IPR016130 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1077 Cam-Chr3:19925367 Cam09g1098 Cam-Chr9:11462246 6.40E-56 dispersed
Cam02g1872 Cam-Chr2:31755175 Cam09g1098 Cam-Chr9:11462246 5.70E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1098 K18045 - csv:101209768 354.755