Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g1148 | ATGGAGCTATTTCCAGCACAACCAGATTTATCACTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCATCTTGGAGAAGAACAAGTAGTTCTTCACAAGAAGAAGTTGATTTGGGGTTTTGGAATAATCTTAGTTTGGAGTCTTCTTCTAAATCCACTCCCAAACATCATCATCCGCATCATCATCATCTTCATCATCTTCATCCTCACTCTTGTTTTGATCTCTCTCTCTCAAATTTAACCCAAATTAACCATCATCAATACCCAAACATATCTCCTCCTCCTAGTACTCCTAATCATCTTCTTCTTCATCATCATCATCATCATCATCGTTATCCCGCTCTCGATACCACCGCACACCTTTTCGAAACCCTAAACAAAACCCACCACCGACCCGCCATTTTCCACCAGACGCCATCACTTGACCCGCCACCACCTCCCTCGCTCCCGTTTCCGGGCCAAACCAATGGGCAAGACTTGGGATTTTTGCGACCCATTAGAGGAATTCCAGTGTACCATCAGACGAATAACCCCTCCGGCACCGGAAACGGCGGTGTTGTCACTCCCTCCTCTGCTGGTCACGGCCAGATTATGATGCGATCGAGATTCTTGTCGAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCTCGGATGAGATGGACTTCCACTCTTCATGCTCGCTTTGTTCATGCTGTTGAACTTCTTGGTGGCCATGAAAGAGCTACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACTTTAGCTCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGACATTCAAAAACCAGCCATGGGAAGACAAAATGACAACTCAATTCAACAAACAACAAGGCAAAACCCTCACCAAGATAAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTACCAAATGATTCTTCTAGGGACCTTTCTTCATCCCTCGAGAATGATATGGATCCAAAGTGCTCAAACAATGAGAGACTATCAGAAATAAGCTCATCAACAGATCTTTGTGGTGTGACAAATAATCCTCATCAAAAGCCTAATTTAGAATTCACATTAGGAAGGCCAATTTGA | 1215 | 43.79 | MELFPAQPDLSLQISPPNTNKPSSSWRRTSSSSQEEVDLGFWNNLSLESSSKSTPKHHHPHHHHLHHLHPHSCFDLSLSNLTQINHHQYPNISPPPSTPNHLLLHHHHHHHRYPALDTTAHLFETLNKTHHRPAIFHQTPSLDPPPPPSLPFPGQTNGQDLGFLRPIRGIPVYHQTNNPSGTGNGGVVTPSSAGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPAMGRQNDNSIQQTTRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDMDPKCSNNERLSEISSSTDLCGVTNNPHQKPNLEFTLGRPI | 404 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 12092861 | 12097549 | - | CaPI482276_09g011480.1 | Cam09g1148 | 135477 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g1148 | 404 | Gene3D | - | 216 | 273 | - | - | |
Cam09g1148 | 404 | MobiDBLite | consensus disorder prediction | 11 | 32 | - | - | |
Cam09g1148 | 404 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 217 | 270 | IPR006447 | GO:0003677(InterPro) | |
Cam09g1148 | 404 | MobiDBLite | consensus disorder prediction | 49 | 68 | - | - | |
Cam09g1148 | 404 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cam09g1148 | 404 | Pfam | Myb-like DNA-binding domain | 218 | 269 | IPR001005 | - | |
Cam09g1148 | 404 | MobiDBLite | consensus disorder prediction | 352 | 371 | - | - | |
Cam09g1148 | 404 | SUPERFAMILY | Homeodomain-like | 214 | 270 | IPR009057 | - | |
Cam09g1148 | 404 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 6 | 403 | IPR044847 | GO:0000976(InterPro)|GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0010158(InterPro) | |
Cam09g1148 | 404 | FunFam | Myb family transcription factor | 215 | 273 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g2142 | Cam-Chr5:29858106 | Cam09g1148 | Cam-Chr9:12092861 | 3.60E-30 | dispersed | |
Cam08g2020 | Cam-Chr8:25892384 | Cam09g1148 | Cam-Chr9:12092861 | 1.70E-32 | dispersed | |
Cam09g1148 | Cam-Chr9:12092861 | Cam11g0066 | Cam-Chr11:2247113 | 5.30E-17 | dispersed | |
Cam01g0881 | Cam-Chr1:10316343 | Cam09g1148 | Cam-Chr9:12092861 | 2.40E-33 | transposed | |
Cam04g0693 | Cam-Chr4:21211930 | Cam09g1148 | Cam-Chr9:12092861 | 3.90E-20 | transposed | |
Cam05g1220 | Cam-Chr5:11550842 | Cam09g1148 | Cam-Chr9:12092861 | 1.20E-44 | transposed | |
Cam10g0130 | Cam-Chr10:2908328 | Cam09g1148 | Cam-Chr9:12092861 | 1.10E-67 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52597 | None | None | None | None | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g1148 | - | - | - | 0.0 |