Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1148 ATGGAGCTATTTCCAGCACAACCAGATTTATCACTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCATCTTGGAGAAGAACAAGTAGTTCTTCACAAGAAGAAGTTGATTTGGGGTTTTGGAATAATCTTAGTTTGGAGTCTTCTTCTAAATCCACTCCCAAACATCATCATCCGCATCATCATCATCTTCATCATCTTCATCCTCACTCTTGTTTTGATCTCTCTCTCTCAAATTTAACCCAAATTAACCATCATCAATACCCAAACATATCTCCTCCTCCTAGTACTCCTAATCATCTTCTTCTTCATCATCATCATCATCATCATCGTTATCCCGCTCTCGATACCACCGCACACCTTTTCGAAACCCTAAACAAAACCCACCACCGACCCGCCATTTTCCACCAGACGCCATCACTTGACCCGCCACCACCTCCCTCGCTCCCGTTTCCGGGCCAAACCAATGGGCAAGACTTGGGATTTTTGCGACCCATTAGAGGAATTCCAGTGTACCATCAGACGAATAACCCCTCCGGCACCGGAAACGGCGGTGTTGTCACTCCCTCCTCTGCTGGTCACGGCCAGATTATGATGCGATCGAGATTCTTGTCGAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCTCGGATGAGATGGACTTCCACTCTTCATGCTCGCTTTGTTCATGCTGTTGAACTTCTTGGTGGCCATGAAAGAGCTACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACTTTAGCTCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGACATTCAAAAACCAGCCATGGGAAGACAAAATGACAACTCAATTCAACAAACAACAAGGCAAAACCCTCACCAAGATAAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTACCAAATGATTCTTCTAGGGACCTTTCTTCATCCCTCGAGAATGATATGGATCCAAAGTGCTCAAACAATGAGAGACTATCAGAAATAAGCTCATCAACAGATCTTTGTGGTGTGACAAATAATCCTCATCAAAAGCCTAATTTAGAATTCACATTAGGAAGGCCAATTTGA 1215 43.79 MELFPAQPDLSLQISPPNTNKPSSSWRRTSSSSQEEVDLGFWNNLSLESSSKSTPKHHHPHHHHLHHLHPHSCFDLSLSNLTQINHHQYPNISPPPSTPNHLLLHHHHHHHRYPALDTTAHLFETLNKTHHRPAIFHQTPSLDPPPPPSLPFPGQTNGQDLGFLRPIRGIPVYHQTNNPSGTGNGGVVTPSSAGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPAMGRQNDNSIQQTTRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDMDPKCSNNERLSEISSSTDLCGVTNNPHQKPNLEFTLGRPI 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12092861 12097549 - CaPI482276_09g011480.1 Cam09g1148 135477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1148 404 Gene3D - 216 273 - -
Cam09g1148 404 MobiDBLite consensus disorder prediction 11 32 - -
Cam09g1148 404 NCBIfam myb-like DNA-binding domain, SHAQKYF class 217 270 IPR006447 GO:0003677(InterPro)
Cam09g1148 404 MobiDBLite consensus disorder prediction 49 68 - -
Cam09g1148 404 MobiDBLite consensus disorder prediction 1 32 - -
Cam09g1148 404 Pfam Myb-like DNA-binding domain 218 269 IPR001005 -
Cam09g1148 404 MobiDBLite consensus disorder prediction 352 371 - -
Cam09g1148 404 SUPERFAMILY Homeodomain-like 214 270 IPR009057 -
Cam09g1148 404 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 6 403 IPR044847 GO:0000976(InterPro)|GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0010158(InterPro)
Cam09g1148 404 FunFam Myb family transcription factor 215 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2142 Cam-Chr5:29858106 Cam09g1148 Cam-Chr9:12092861 3.60E-30 dispersed
Cam08g2020 Cam-Chr8:25892384 Cam09g1148 Cam-Chr9:12092861 1.70E-32 dispersed
Cam09g1148 Cam-Chr9:12092861 Cam11g0066 Cam-Chr11:2247113 5.30E-17 dispersed
Cam01g0881 Cam-Chr1:10316343 Cam09g1148 Cam-Chr9:12092861 2.40E-33 transposed
Cam04g0693 Cam-Chr4:21211930 Cam09g1148 Cam-Chr9:12092861 3.90E-20 transposed
Cam05g1220 Cam-Chr5:11550842 Cam09g1148 Cam-Chr9:12092861 1.20E-44 transposed
Cam10g0130 Cam-Chr10:2908328 Cam09g1148 Cam-Chr9:12092861 1.10E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52597 None None None None Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1148 - - - 0.0