Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1170 ATTTGGAGTAATTTTGGAACTGTTCGGACACTTTTCAGCAAGGATCCCAGTCTGCCTTGTTACCATCGCCACCAGTCAATGCTCATTCCTACGGCTGTCAATGCCCTCAAATCCTCAAGGTCAATATCTTGGTTGCCGACTGGTAGGCTTCAACAAACCTTGGCGAGATGTCTGGAGCTGAGTGGGATATCTCTGCATTCGGGGAAGGTTTCGAAAGTGAAATTATGTCCGGAATTTGCAGGTCGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCCTCAATCGATTATGCCGAAGAGTCGCCTCTTTGTACCACACTTTCTAAGGATGGGTTCAAAATTCGAACAGTTGAGCATTTGCTTTCTGCCATGGAGGCTATGGGGGTTGACAATTGTAGGATCGAGATAGCAAATGAAGATGATAAAGATAGTGAAGTGGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGAGGAGATTGGTCTTAAGTTGGCTATAGACCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTTGTATCACTTATGGAATTGACTTTCCTCAGGTGCCTGACATTGGCTGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCTCCATCAAGAACCTTTTGCATTTATGAAGAGGTAGAGCAAATGCGTAATATGGGACTCATAAAAGGAGGCTCCATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTAATTGGGGATCTGTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGTTTACAAGGGTGGTCATGCTACGCACGTTAATTTTGTTCGCCGCTTATCAGAAAACATTTGA 1020 44.51 IWSNFGTVRTLFSKDPSLPCYHRHQSMLIPTAVNALKSSRSISWLPTGRLQQTLARCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLSKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDKDSEVEVPIFDGSAGKWVDAIEEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVCITYGIDFPQVPDIGCQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMRNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDLIGDLSLFAQLGSQGIPVAHIVVYKGGHATHVNFVRRLSENI 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12501690 12519734 - CaPI482276_09g011700.1 Cam09g1170 135499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1170 339 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 28 338 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cam09g1170 339 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 51 336 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cam09g1170 339 Gene3D lpxc deacetylase, domain 1 49 174 IPR015870 GO:0008759(InterPro)|GO:0009245(InterPro)
Cam09g1170 339 SUPERFAMILY Ribosomal protein S5 domain 2-like 189 337 IPR020568 -
Cam09g1170 339 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 51 336 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cam09g1170 339 Gene3D lpxc deacetylase, domain 2 186 339 IPR011334 GO:0008759(InterPro)|GO:0009245(InterPro)
Cam09g1170 339 SUPERFAMILY Ribosomal protein S5 domain 2-like 50 169 IPR020568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1170 K02535 - csv:101205101 590.112