Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g1197 | ATGGCTGGTCTGGATTTAGGCAATCGCTATATTCACCAACTTCAAAGGCCTAATTTCAACCTTCACCACCATCATCAGAACCACCACCATCCCGACTCTCAATCTGGTCATGACGATGAATCCCATCCTCCGTCAGAATTTGTCACCGCCGCAGACTCTACCGCCCCTGCCACAGATATGGTGGCCTCTCGCCGACCACGCGGCCGTCCACCCGGTTCCAAAAACAAACCGAAGCCACCGGTCATCATAACCCGAGAAAGCGCCAATACCCTAAGGGCTCATATTCTTGAGGTTGGTAATGGCTGTGACGTCTTCGATAGCATCGCTACCTATGCTCGTCGTCGCCAGCGAGGGATCTGCATCTTGAGCGGTAGTGGAATGGTAATGAATGTCAACTTACGGCAACCGACGGCGACGGGGTCTGTGTTAACCCTACATGGAAGGTTTGAGATATTATCCCTTACTGGATCTTTCTTGCCGCCGCCTGCTCCTCCCGGCGCTACTAGTTTGACTATATACTTAGCCGGTGGGCAAGGGCAAGTGGTCGGTGGAAACGTTGTTGGGGAATTGGTGGCGGCAGGGCCAGTTACAATCATCGCGGCATCATTTACAAATGTAGCATATGAGAGATTGCCACTAGAAGAACAAGAACAAGAACAAGAACAAGAACAAGAGCAAGATCAACTTCAGATGCAGCCACCGACGTCGCAGGGCGGCAGTAGCGGTGGAAACAATAACAACCCATTTCCAGATCCATCTTCAGGGCTTCCTTTCTTCAATTTGCCTCTAAATATGCAGAACCAAATTCAGCTACCATTTTGA | 822 | 50.49 | MAGLDLGNRYIHQLQRPNFNLHHHHQNHHHPDSQSGHDDESHPPSEFVTAADSTAPATDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDSIATYARRRQRGICILSGSGMVMNVNLRQPTATGSVLTLHGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERLPLEEQEQEQEQEQEQDQLQMQPPTSQGGSSGGNNNNPFPDPSSGLPFFNLPLNMQNQIQLPF | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 13079260 | 13080081 | - | CaPI482276_09g011970.1 | Cam09g1197 | 135526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g1197 | 273 | CDD | DUF296 | 92 | 175 | IPR005175 | - | |
Cam09g1197 | 273 | MobiDBLite | consensus disorder prediction | 215 | 260 | - | - | |
Cam09g1197 | 273 | Gene3D | - | 91 | 226 | - | - | |
Cam09g1197 | 273 | MobiDBLite | consensus disorder prediction | 22 | 81 | - | - | |
Cam09g1197 | 273 | ProSiteProfiles | PPC domain profile profile. | 88 | 225 | IPR005175 | - | |
Cam09g1197 | 273 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 28 | 265 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cam09g1197 | 273 | MobiDBLite | consensus disorder prediction | 31 | 45 | - | - | |
Cam09g1197 | 273 | FunFam | AT-hook motif nuclear-localized protein | 91 | 219 | - | - | |
Cam09g1197 | 273 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 92 | 204 | IPR005175 | - | |
Cam09g1197 | 273 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 88 | 217 | - | - | |
Cam09g1197 | 273 | MobiDBLite | consensus disorder prediction | 225 | 260 | - | - | |
Cam09g1197 | 273 | PIRSF | ESCAROLA | 7 | 271 | IPR014476 | GO:0003680(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam06g0196 | Cam-Chr6:3789490 | Cam09g1197 | Cam-Chr9:13079260 | 4.60E-60 | dispersed | |
Cam07g0345 | Cam-Chr7:4631431 | Cam09g1197 | Cam-Chr9:13079260 | 7.30E-58 | dispersed | |
Cam08g1631 | Cam-Chr8:22524887 | Cam09g1197 | Cam-Chr9:13079260 | 1.70E-44 | dispersed | |
Cam09g1197 | Cam-Chr9:13079260 | Cam11g0699 | Cam-Chr11:8606729 | 1.50E-50 | dispersed | |
Cam10g0169 | Cam-Chr10:3301644 | Cam09g1197 | Cam-Chr9:13079260 | 2.10E-80 | wgd | |
Cam05g0298 | Cam-Chr5:2841698 | Cam09g1197 | Cam-Chr9:13079260 | 7.40E-81 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g1197 | - | - | - | 0.0 |