Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1229 ATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTCTGAACTTCTTCTTATCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTGTTGGTTGAGTACTTGCAATCTCCTAGTGATGTCCCAGGACCTTCGTCGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAATATCTTTGATAACCTTCCAAAAGCCTGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTCTCTTGTTTTGGGTGTATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTTATTCAGTTTTGCTGCTTCTACTGATTTTGGTGCAACTAGGATGTGCTGCCTTCATATTCTTTGACAAAACTTGGAGAGATGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTCCTTGAAGACAAGTGGGAAATCATCAGATGGGTTGCATTAGGAGCTGTAATTTTTGAGGCCCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGCAGACTATGACAGCGATGATGAGTACATTGCTCCAAGGCAACAAATCAGACAACCATTGATCAATAGGCCTGCTGCTCCTGCGACAGGTGTGCCTGTGGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCAGAGTTCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCCTCAGCCAGCCGAAGAAAAGAGCCGCTGCACCATCATATGGATGGGTCAGCATAGGACCAAGGAAAATGATTGTAAGCTCCATCTCACTTGGGGAAAGACTGCTGGCTGGAAGTTACTTTTAATTGTGAGTTCAATCCGAATATTGGTGGTTGTAATATTTGGTGTAGTTTTGCATGGAATTGAAACTTTAGGCGATGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCTTTTGTCGAAGATATCATTCGACGACAGGTTGAGATAGCTGTGCTCAAGGATCCTCGAATGGCTGCTTCACTCCTTCGCTTGCATTTTCATGATTGTTTTGTTATGGGATGTGATGCATCAGTTCTTTTGGACAGCAATGATGAGATGGTGAGCGAAAAGCAAGCAGCTCCAAATTTAAACTCTCTTCGCGGTTTCAATGTTATCGATGAGATAAAATACATATTGGAAGAAGCTTGTCCTTACACTGTGTCTTGTGCTGATATTTTGACCATTGCCGCCCGTGATGCTGTTGTGCTCAGAGGAGGCCCTGGATGGCCAGTGTTATTGGGAAGGAAAGACTCCTTGGAAGCAAGCTTTGATGGAGCCAACAAATACATTCCTTCTCCCAATTCCTCCCTTGAGACCCTAATTGCCAATTTTCAAGAACAAGGTCTTAATGTTGGAGACTTGGTTGCTCTATCTGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTTAGGCAAAGAGTATACCAAATGAATCCAGAAGAAGAATATGACAGATACAAGAGATACAACACATACAGAAGAATTTTAAGGTCAATCTGCCCTAAAACAGGGCAGGATCAAAGGGTAGCACCCCTAGATTTTAGGACACCTTCAAGATTTGACAATCACTATTTCCTCAACATTCTTGAAGGTAAAGGGCTTTTGGGGTCTGACAATGTGCTCATAACTCAAGACCATGAAGGTGAAATCACAAGACAAGTTTGGAGTTATGCCTCTGACCAAACCCTTTTCTTTGATTCCTTTGTTAAGTCCATTGTCAAGATGGGCAACATCAATGTCCTCACTTCCCATCAAGGTGAAGTCAGAAGGAATTGTAGGTTTACCAATCATTAG 1920 43.49 MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDVPGPSSSGDHDLVQLGRPMLMAVSLSSNIFDNLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCYSVLLLLLILVQLGCAAFIFFDKTWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPADYDSDDEYIAPRQQIRQPLINRPAAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIIWMGQHRTKENDCKLHLTWGKTAGWKLLLIVSSIRILVVVIFGVVLHGIETLGDGLLVFDYYKETCPFVEDIIRRQVEIAVLKDPRMAASLLRLHFHDCFVMGCDASVLLDSNDEMVSEKQAAPNLNSLRGFNVIDEIKYILEEACPYTVSCADILTIAARDAVVLRGGPGWPVLLGRKDSLEASFDGANKYIPSPNSSLETLIANFQEQGLNVGDLVALSGSHTIGKARCLSFRQRVYQMNPEEEYDRYKRYNTYRRILRSICPKTGQDQRVAPLDFRTPSRFDNHYFLNILEGKGLLGSDNVLITQDHEGEITRQVWSYASDQTLFFDSFVKSIVKMGNINVLTSHQGEVRRNCRFTNH 639
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 13954590 13964130 - CaPI482276_09g012290.1 Cam09g1229 135558
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1229 639 PRINTS Plant peroxidase signature 344 363 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Plant peroxidase signature 569 586 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Plant peroxidase signature 493 505 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Plant peroxidase signature 427 437 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Plant peroxidase signature 612 625 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Plant peroxidase signature 446 461 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Plant peroxidase signature 368 388 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Plant peroxidase signature 553 568 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Plant peroxidase signature 408 421 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 ProSitePatterns Peroxidases proximal heme-ligand signature. 494 504 IPR019793 -
Cam09g1229 639 PRINTS Haem peroxidase superfamily signature 494 509 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Haem peroxidase superfamily signature 446 458 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Haem peroxidase superfamily signature 366 380 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Haem peroxidase superfamily signature 428 445 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 PRINTS Haem peroxidase superfamily signature 555 570 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 ProSitePatterns Peroxidases active site signature. 366 377 IPR019794 GO:0004601(InterPro)
Cam09g1229 639 CDD secretory_peroxidase 335 637 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam09g1229 639 PANTHER PEROXIDASE 72-RELATED 317 636 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 FunFam Peroxidase 472 617 - -
Cam09g1229 639 FunFam Peroxidase 338 482 - -
Cam09g1229 639 Gene3D - 339 638 - -
Cam09g1229 639 ProSiteProfiles Plant heme peroxidase family profile. 334 638 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 Pfam Tetraspanin family 8 137 IPR018499 GO:0016020(InterPro)
Cam09g1229 639 Pfam Peroxidase 352 598 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1229 639 Gene3D Peroxidase, domain 2 472 618 - -
Cam09g1229 639 SUPERFAMILY Heme-dependent peroxidases 336 638 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2530 Cam-Chr5:33137314 Cam09g1229 Cam-Chr9:13954590 8.30E-80 dispersed
Cam06g0440 Cam-Chr6:6517270 Cam09g1229 Cam-Chr9:13954590 6.90E-78 dispersed
Cam09g1229 Cam-Chr9:13954590 Cam11g0604 Cam-Chr11:7585411 2.30E-75 dispersed
Cam09g1229 Cam-Chr9:13954590 Cam07g0902 Cam-Chr7:22142109 4.10E-88 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1229 K00430 - csv:101207771 581.637