Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam09g1229 | ATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTCTGAACTTCTTCTTATCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTGTTGGTTGAGTACTTGCAATCTCCTAGTGATGTCCCAGGACCTTCGTCGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAATATCTTTGATAACCTTCCAAAAGCCTGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTCTCTTGTTTTGGGTGTATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTTATTCAGTTTTGCTGCTTCTACTGATTTTGGTGCAACTAGGATGTGCTGCCTTCATATTCTTTGACAAAACTTGGAGAGATGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTCCTTGAAGACAAGTGGGAAATCATCAGATGGGTTGCATTAGGAGCTGTAATTTTTGAGGCCCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGCAGACTATGACAGCGATGATGAGTACATTGCTCCAAGGCAACAAATCAGACAACCATTGATCAATAGGCCTGCTGCTCCTGCGACAGGTGTGCCTGTGGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCAGAGTTCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCCTCAGCCAGCCGAAGAAAAGAGCCGCTGCACCATCATATGGATGGGTCAGCATAGGACCAAGGAAAATGATTGTAAGCTCCATCTCACTTGGGGAAAGACTGCTGGCTGGAAGTTACTTTTAATTGTGAGTTCAATCCGAATATTGGTGGTTGTAATATTTGGTGTAGTTTTGCATGGAATTGAAACTTTAGGCGATGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCTTTTGTCGAAGATATCATTCGACGACAGGTTGAGATAGCTGTGCTCAAGGATCCTCGAATGGCTGCTTCACTCCTTCGCTTGCATTTTCATGATTGTTTTGTTATGGGATGTGATGCATCAGTTCTTTTGGACAGCAATGATGAGATGGTGAGCGAAAAGCAAGCAGCTCCAAATTTAAACTCTCTTCGCGGTTTCAATGTTATCGATGAGATAAAATACATATTGGAAGAAGCTTGTCCTTACACTGTGTCTTGTGCTGATATTTTGACCATTGCCGCCCGTGATGCTGTTGTGCTCAGAGGAGGCCCTGGATGGCCAGTGTTATTGGGAAGGAAAGACTCCTTGGAAGCAAGCTTTGATGGAGCCAACAAATACATTCCTTCTCCCAATTCCTCCCTTGAGACCCTAATTGCCAATTTTCAAGAACAAGGTCTTAATGTTGGAGACTTGGTTGCTCTATCTGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTTAGGCAAAGAGTATACCAAATGAATCCAGAAGAAGAATATGACAGATACAAGAGATACAACACATACAGAAGAATTTTAAGGTCAATCTGCCCTAAAACAGGGCAGGATCAAAGGGTAGCACCCCTAGATTTTAGGACACCTTCAAGATTTGACAATCACTATTTCCTCAACATTCTTGAAGGTAAAGGGCTTTTGGGGTCTGACAATGTGCTCATAACTCAAGACCATGAAGGTGAAATCACAAGACAAGTTTGGAGTTATGCCTCTGACCAAACCCTTTTCTTTGATTCCTTTGTTAAGTCCATTGTCAAGATGGGCAACATCAATGTCCTCACTTCCCATCAAGGTGAAGTCAGAAGGAATTGTAGGTTTACCAATCATTAG | 1920 | 43.49 | MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDVPGPSSSGDHDLVQLGRPMLMAVSLSSNIFDNLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCYSVLLLLLILVQLGCAAFIFFDKTWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPADYDSDDEYIAPRQQIRQPLINRPAAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIIWMGQHRTKENDCKLHLTWGKTAGWKLLLIVSSIRILVVVIFGVVLHGIETLGDGLLVFDYYKETCPFVEDIIRRQVEIAVLKDPRMAASLLRLHFHDCFVMGCDASVLLDSNDEMVSEKQAAPNLNSLRGFNVIDEIKYILEEACPYTVSCADILTIAARDAVVLRGGPGWPVLLGRKDSLEASFDGANKYIPSPNSSLETLIANFQEQGLNVGDLVALSGSHTIGKARCLSFRQRVYQMNPEEEYDRYKRYNTYRRILRSICPKTGQDQRVAPLDFRTPSRFDNHYFLNILEGKGLLGSDNVLITQDHEGEITRQVWSYASDQTLFFDSFVKSIVKMGNINVLTSHQGEVRRNCRFTNH | 639 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 13954590 | 13964130 | - | CaPI482276_09g012290.1 | Cam09g1229 | 135558 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 344 | 363 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 569 | 586 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 493 | 505 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 427 | 437 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 612 | 625 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 446 | 461 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 368 | 388 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 553 | 568 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Plant peroxidase signature | 408 | 421 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 494 | 504 | IPR019793 | - | |
| Cam09g1229 | 639 | PRINTS | Haem peroxidase superfamily signature | 494 | 509 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Haem peroxidase superfamily signature | 446 | 458 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Haem peroxidase superfamily signature | 366 | 380 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Haem peroxidase superfamily signature | 428 | 445 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | PRINTS | Haem peroxidase superfamily signature | 555 | 570 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | ProSitePatterns | Peroxidases active site signature. | 366 | 377 | IPR019794 | GO:0004601(InterPro) | |
| Cam09g1229 | 639 | CDD | secretory_peroxidase | 335 | 637 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Cam09g1229 | 639 | PANTHER | PEROXIDASE 72-RELATED | 317 | 636 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | FunFam | Peroxidase | 472 | 617 | - | - | |
| Cam09g1229 | 639 | FunFam | Peroxidase | 338 | 482 | - | - | |
| Cam09g1229 | 639 | Gene3D | - | 339 | 638 | - | - | |
| Cam09g1229 | 639 | ProSiteProfiles | Plant heme peroxidase family profile. | 334 | 638 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | Pfam | Tetraspanin family | 8 | 137 | IPR018499 | GO:0016020(InterPro) | |
| Cam09g1229 | 639 | Pfam | Peroxidase | 352 | 598 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam09g1229 | 639 | Gene3D | Peroxidase, domain 2 | 472 | 618 | - | - | |
| Cam09g1229 | 639 | SUPERFAMILY | Heme-dependent peroxidases | 336 | 638 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g2530 | Cam-Chr5:33137314 | Cam09g1229 | Cam-Chr9:13954590 | 8.30E-80 | dispersed | |
| Cam06g0440 | Cam-Chr6:6517270 | Cam09g1229 | Cam-Chr9:13954590 | 6.90E-78 | dispersed | |
| Cam09g1229 | Cam-Chr9:13954590 | Cam11g0604 | Cam-Chr11:7585411 | 2.30E-75 | dispersed | |
| Cam09g1229 | Cam-Chr9:13954590 | Cam07g0902 | Cam-Chr7:22142109 | 4.10E-88 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam09g1229 | K00430 | - | csv:101207771 | 581.637 |