Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam09g1308 | ATGGCACTAGCAGTTAAGGCTTTTCCGTTCACTGTGGTGAGTCACGTGCTGGCAATCGTGGCTCTCATTCTTGTCCTGGTTTGGACCATTCACTTCAGAGGCGGCCTCGCTTGGGAGGCTGTCAATAAGAATCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATAATTAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTGCTACACGGCGTCGCATTGGCACTGGGTATTGTGGGGATCATCGCCGCTTTCAAGAACCATAATGAGAGTGGGATCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATCAGCCTTTATGGTCTCCAGTGGGTGTACGGGTTCGTGACATTCTTCTACCCAGGAGGATCCGCAGACCTCCGACGAGCGTCACTCCCATGGCACGTGCTTTTTGGGATTACTATATACATATTGGCCGTCGGCAACTCGGCATTGGGTTTCCTTGAGAAGCTCACATTTCTAGAGAGCTCTGGCCTCGCTAAATACGGCACCGAGGCCTTTCTCGTCAACTTCACCGCCATCACCACCGTCGTTTTTGCACTGTTTGTGATTTTGTCTGTTATTTCTCAGCCTTGCGTTCAAGAAGACAACCATGGCGATTATTCTGCGATATGA | 699 | 47.5 | MALAVKAFPFTVVSHVLAIVALILVLVWTIHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFVTFFYPGGSADLRRASLPWHVLFGITIYILAVGNSALGFLEKLTFLESSGLAKYGTEAFLVNFTAITTVVFALFVILSVISQPCVQEDNHGDYSAI | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 16611952 | 16620589 | + | CaPI482276_09g013080.1 | Cam09g1308 | 135637 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam09g1308 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Cam09g1308 | 232 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Cam09g1308 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Cam09g1308 | 232 | Gene3D | - | 2 | 226 | - | - | |
| Cam09g1308 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Cam09g1308 | 232 | PANTHER | CYTOCHROME B561-RELATED | 5 | 222 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Cam09g1308 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g0688 | Cam-Chr1:7643405 | Cam09g1308 | Cam-Chr9:16611952 | 7.30E-48 | dispersed | |
| Cam07g0673 | Cam-Chr7:13948462 | Cam09g1308 | Cam-Chr9:16611952 | 1.80E-46 | dispersed | |
| Cam09g1308 | Cam-Chr9:16611952 | Cam11g0556 | Cam-Chr11:7040323 | 3.50E-53 | dispersed | |
| Cam09g1308 | Cam-Chr9:16611952 | Cam05g2511 | Cam-Chr5:32929642 | 5.10E-28 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam09g1308 | K08360 | - | csv:101209308 | 387.497 |