Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1357 ATGAAGCTCATCCCCTTCCTTCCATGGCTGAACCTCCACATGGCCCTCTTCTTCTTCTTCTTCCTCCTTGCTTCTTCTTCACTTCTTCATTCATCCCCTGCCTCTTCACTTCCCCACAATGAAGGACGAGCGCTTATGTCAATCAAGGCCTCGTTTAGCAATGTAGCTAATGTGTTGCTTGACTGGGATGATGATCACAACCACGATTTCTGTTCATGGCGTGGAGTTTTCTGCGACAATGTTAGCCTTTCTGTTGCTGCTTTGAACTTGTCCAACTTGAATCTGGGTGGGGAGATTTCACCATCCATTGGAGATTTGAGAAACTTACAGTCAATTGACTTTCAAGGGAATAAACTGACCGGCCAAATCCCTGATGAGATTGGTAACTGTGGTCTGCTTGTCCATTTGGACTTGTCTGATAATTTGCTCTATGGAGACATCCCCTTCACGGTTTCAAAGCTAAAGCAGCTCGAGTTTTTAAATATGAAGAACAATCAGTTGACCGGTCCGATTCCTTCAACCTTAACCCAGATTCCCAATCTGAAAACTCTTGATCTTGCACGAAACCAGCTTACTGGGGAGATACCTAGATTAATCTATTGGAATGAAGTTTTGCAATATCTTGGATTACGAGGGAACTTTTTGACAGGGTCGTTGTCCTCCGATATGTGTCAATTGACTGGCTTGTGGTATTTTGATGTAAGGGGAAATAATCTGACTGGAACGATACCTGATAGCATAGGAAACTGTACCAGTTTTGAAATTCTGGATATATCCTACAATCAGATCTCGGGAGAGATTCCATACAACATTGGATTTCTACAAGTGGCCACTTTATCATTACAGGGAAATAGGTTGAGTGGTAAGATTCCTGATGTCATTGGATTGATGCAGGCCCTTGCTGTTCTGGATTTGAGTGAGAATGAGCTTGAAGGACCAATACCGCCAATACTTGGCAACTTGTCCTACACAGGAAAATTGTATCTACATGGAAACAAGTTGACTGGGTCAATTCCTCCTGAGCTGGGCAATATGTCAAAGCTTAGCTACTTGCAACTAAATGATAACCAGTTGGTTGGCACAATTCCTTCTGAACTTGGGAAATTGGATCAGTTGTTTGAATTAAATCTTGCCAATAATTATCTTGAAGGACCCATCCCTCATAACATCAGCTCTTGCACTGCATTGAATCAATTGAACCTTTCAGCAAACAACTTCAAAGGCAGGATTCCCATGGAGCTGGGGCGCATAGTAAACCTCGATACATTGGATCTATCTTGCAATTACTTCTTGGGTCCTGTTCCTGCTTCTATTGGTGATTTGGAACACCTTCTTAGCCTCAATTTGAGCAATAACCGACTCGTCGGGCCGTTGCCGGCAGAATTTGGGAATCTCCGAAGTGTTCAGACTATTGATATGTCATTCAACAACTTTTCTGGTAGCATACCCATGGAGTTGGGTCAACTGCAAAATATTATCTCCCTCATTTTGAACAACAACCATTTTCAAGGGAAAATACCTGATCAGCTGACTAATTGTTTTAGTCTTGCCAATTTGAACTTGTCATACAACAACTTATCTGGTATCTTACCTCCCATGAAAAATTTCTCTCGATTCGAACCAAATAGCTTTATTGGGAATCCGCTGCTGTGTGGAAACTGGCTGGGGTCGATCTGTGGGCCTTATATAGAAAAATCTCGAGCAATGTTGTCTCGGACAGTGGTTGTTTGTATGACATTTGGATTCATAGTATTGTTGTCGATGGTTATAATTGCCGTTTACAAGTCGAATCCCTCGAAGCAATTGATGAAGGGTTCTAGCAAGACTGGGCAAGGTCCTCCAAATCTTGTGGTACTTCATATGGATATGGCTATTCACACCTTTGAGGACATTATGAGAATGACTGAGAATCTAAGCGAGAAGTACATTATTGGTTACGGAGCTTCTAGCACTGTGTACAAATGTTTACTGAAAAATTCCCGACCTATTGCAATTAAGCGACTTTATAATCACTACGCACACAATTTACGGGAGTTTGAGACCGAACTCGAAACCATTGGTAGTATCAGACATAGAAATCTTGTTAGCCTTCATGGTTATTCATTATCTCCCTGTGGGAATCTCCTCTTCTATGACTTCATGGAAAATGGTTCACTCTGGGATCTGCTTCATGGGACAGGTAAGAAGGTTAAACTGGATTGGGAAGCACGTCTGAAAATTGCGGTTGGAGCTGCGCAAGGGCTTGCATATCTTCACCATGATTGTAACCCTCGAATCATTCACCGGGATGTCAAGTCTTCAAATATTCTACTGGATGAAAATTTTGAGGCCCATCTTTCTGATTTCGGGATTGCCAAATGCATCCCAACTGCCAAAACACACGCGTCGACTTATGTGCTTGGAACAATTGGCTACATTGATCCGGAGTATGCCCGGACCTCCCGGCTTAATGAGAAGTCTGATGTTTATAGCTTTGGCATTGTTCTTCTTGAACTACTGACCGGGAAGAAAGCTGTGGATGATGAGTCGAATTTGCATCAGCTGATATTGTCCAAGACTGATAACAATACCGTGATGGAAGCTGTTGATCCTGAGGTTTCAGTCACCTGCATTGATTTAGCCCATGTTCGAAAAACATTCCAGCTTGCTCTCCTCTGCACAAAACACAATCCCTCTGAACGGCCAACCATGCACGAAGTTGCACGAGTATTGATCTCCCTCCAGCCACCACCACCACCTACTGTGAAACAAACTTCATTTCCCACGAAAACGTTGGATTACGCACAGTTTGTGATCGAAAAGGGTCAGAATCGAAACTTGAAAGGGCAGGAGGAGCAGCAGAAGTCAGATGTGAATACTTCGGATGCTCGGTGGTTTGTTCGGTTTGGGGAAGTGATGTCTGAACAACACAGTTTGAATCAATAA 2925 42.94 MKLIPFLPWLNLHMALFFFFFLLASSSLLHSSPASSLPHNEGRALMSIKASFSNVANVLLDWDDDHNHDFCSWRGVFCDNVSLSVAALNLSNLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGLLVHLDLSDNLLYGDIPFTVSKLKQLEFLNMKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNFLTGSLSSDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLSGKIPDVIGLMQALAVLDLSENELEGPIPPILGNLSYTGKLYLHGNKLTGSIPPELGNMSKLSYLQLNDNQLVGTIPSELGKLDQLFELNLANNYLEGPIPHNISSCTALNQLNLSANNFKGRIPMELGRIVNLDTLDLSCNYFLGPVPASIGDLEHLLSLNLSNNRLVGPLPAEFGNLRSVQTIDMSFNNFSGSIPMELGQLQNIISLILNNNHFQGKIPDQLTNCFSLANLNLSYNNLSGILPPMKNFSRFEPNSFIGNPLLCGNWLGSICGPYIEKSRAMLSRTVVVCMTFGFIVLLSMVIIAVYKSNPSKQLMKGSSKTGQGPPNLVVLHMDMAIHTFEDIMRMTENLSEKYIIGYGASSTVYKCLLKNSRPIAIKRLYNHYAHNLREFETELETIGSIRHRNLVSLHGYSLSPCGNLLFYDFMENGSLWDLLHGTGKKVKLDWEARLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILLDENFEAHLSDFGIAKCIPTAKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDDESNLHQLILSKTDNNTVMEAVDPEVSVTCIDLAHVRKTFQLALLCTKHNPSERPTMHEVARVLISLQPPPPPTVKQTSFPTKTLDYAQFVIEKGQNRNLKGQEEQQKSDVNTSDARWFVRFGEVMSEQHSLNQ 974
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 18697253 18702977 - CaPI482276_09g013570.1 Cam09g1357 135686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1357 974 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Cam09g1357 974 Gene3D Phosphorylase Kinase; domain 1 604 713 - -
Cam09g1357 974 Gene3D Transferase(Phosphotransferase) domain 1 714 911 - -
Cam09g1357 974 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 375 905 IPR050647 GO:0009553(PANTHER)|GO:0010103(PANTHER)|GO:0048481(PANTHER)
Cam09g1357 974 ProSiteProfiles Protein kinase domain profile. 638 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1357 974 Pfam Leucine rich repeat 419 478 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 FunFam Leucine-rich repeat receptor-like protein kinase 467 561 - -
Cam09g1357 974 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 38 202 - -
Cam09g1357 974 SUPERFAMILY Protein kinase-like (PK-like) 615 905 IPR011009 -
Cam09g1357 974 SMART LRR_typ_2 106 130 IPR003591 -
Cam09g1357 974 SMART LRR_typ_2 178 202 IPR003591 -
Cam09g1357 974 SMART LRR_typ_2 297 321 IPR003591 -
Cam09g1357 974 SMART LRR_typ_2 441 464 IPR003591 -
Cam09g1357 974 SMART LRR_typ_2 154 177 IPR003591 -
Cam09g1357 974 SMART LRR_typ_2 345 369 IPR003591 -
Cam09g1357 974 SMART LRR_typ_2 489 513 IPR003591 -
Cam09g1357 974 SMART LRR_typ_2 226 250 IPR003591 -
Cam09g1357 974 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 609 713 - -
Cam09g1357 974 FunFam Piriformospora indica-insensitive protein 2 364 459 - -
Cam09g1357 974 CDD STKc_IRAK 644 907 - -
Cam09g1357 974 ProSiteProfiles Leucine-rich repeat profile. 180 202 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 203 274 - -
Cam09g1357 974 Gene3D Ribonuclease Inhibitor 276 561 IPR032675 -
Cam09g1357 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 759 771 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1357 974 SUPERFAMILY L domain-like 39 320 - -
Cam09g1357 974 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 714 914 - -
Cam09g1357 974 Pfam Leucine Rich Repeat 300 321 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 229 250 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 254 274 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 515 532 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 108 130 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 347 369 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 180 199 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 156 176 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 372 393 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Pfam Leucine Rich Repeat 326 345 IPR001611 GO:0005515(InterPro)
Cam09g1357 974 Gene3D Ribonuclease Inhibitor 204 275 IPR032675 -
Cam09g1357 974 Gene3D Ribonuclease Inhibitor 38 203 IPR032675 -
Cam09g1357 974 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 275 363 - -
Cam09g1357 974 SMART serkin_6 638 905 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1357 974 Pfam Protein kinase domain 641 901 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1357 974 ProSitePatterns Protein kinases ATP-binding region signature. 644 666 IPR017441 GO:0005524(InterPro)
Cam09g1357 974 SUPERFAMILY L domain-like 277 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1739 Cam-Chr5:26001283 Cam09g1357 Cam-Chr9:18697253 2.00E-18 dispersed
Cam09g1357 Cam-Chr9:18697253 Cam11g1739 Cam-Chr11:29983053 2.90E-69 dispersed
Cam09g1357 Cam-Chr9:18697253 Cam06g0776 Cam-Chr6:10474972 2.00E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85443 PF00069 Pkinase 2.00E-41 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1357 K20718 - csv:101213139 1737.24