Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1553 ATGTTGCAGTCTTCGATTCGGCGAGTGAGGAAGTTGAATGTTCTGAGGCCTCAGATCTTTGCTCTCGGAAATTCTCGTTTCTCCACTTTTGCTCAACCGTCTTCCAAGCCTCATCCTCCGAGGGTTCCAAATCTCATAGGAGGGACTTTTGTGGATTCTCAATCCTCGGCATTCATAGATGTCATAAACCCAGCAACACAAGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGATGAATTTAAAGCTGCAGTGTCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACTCCAGTTACAACTCGTCAACGAATTATGTTCAAGCTTCAAGAACTTATTAGGCGAGATATAGACAAACTTGCTCTGAATATTACCACAGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCGAATGTGTCACATGGAATTGATACCTACAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCATTCAATTTTCCAGCCATGATCCCCCTATGGATGTTCCCAATTGCTGTTACATGTGGGAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACTAATGATGTTGTTAATGCCATTTGTGATGATGAAGATATAAAAGCAATATCATTTGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTGCAGTCCAATATGGGTGCAAAAAATCATGCAATTGTCTTGCCCGATGCCAGCATAGATGCTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGTATGGCACTTAGTACAGTTGTCTTTGTTGGAGACTCCAAGTTGTGGGAGGATAAACTTGTAGAACGTGCCAAAACTCTGAAGGTAAACTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGATAGGATTCACAGATTGGTTCAATCTGGCATCGATAGTGGAGCCAGGCTACTGCTAGATGGGAGAAATATAGTGGTTCCTGGATACGAGAGTGGAAATTTTATTGGCCCTACTATCTTAACAGATGTGACGCCGGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAGAGTTTAGAGGAGGCCATTAGCATCGTTAACGGAAATAGGTATGGGAATGGAGCTTCCATATTCACAACATCTGGGATAGCGGCGAGGAAGTTTCAAACGGATATTGAAGCCGGACAGGTTGGGATCAATGTTCCAATTCCGGTTCCCTTGCCCTTCTTCTCGTTCACCGGCTCCAAGGCATCTTTTGCTGGGGATCTCAATTTTTATGGCAAGGCTGGGGTCAACTTCTTCACACAGATCAAAACAGTGACACAACAATGGAAAGACTCAGCTGGGGGAACTGCAGTCAACCTTGCAATGCCAACCTCTTTGAAGTCATAG 1614 44.42 MLQSSIRRVRKLNVLRPQIFALGNSRFSTFAQPSSKPHPPRVPNLIGGTFVDSQSSAFIDVINPATQEVVSQVPLTTNDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQSNMGAKNHAIVLPDASIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEDKLVERAKTLKVNSGTEPDADLGPVISKQAKDRIHRLVQSGIDSGARLLLDGRNIVVPGYESGNFIGPTILTDVTPDMECYKEEIFGPVLLCMQAESLEEAISIVNGNRYGNGASIFTTSGIAARKFQTDIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSAGGTAVNLAMPTSLKS 537
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 26092875 26101414 + CaPI482276_09g015530.1 Cam09g1553 135882
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1553 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 287 487 IPR016163 GO:0016620(InterPro)
Cam09g1553 537 CDD ALDH_F6_MMSDH 42 518 IPR010061 GO:0004491(InterPro)
Cam09g1553 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 495 IPR016162 GO:0016491(InterPro)
Cam09g1553 537 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 46 293 - -
Cam09g1553 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 312 323 IPR016160 GO:0016491(InterPro)
Cam09g1553 537 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 6 534 IPR010061 GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
Cam09g1553 537 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 44 518 IPR010061 GO:0004491(InterPro)
Cam09g1553 537 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 287 487 - -
Cam09g1553 537 Pfam Aldehyde dehydrogenase family 50 514 IPR015590 GO:0016491(InterPro)
Cam09g1553 537 SUPERFAMILY ALDH-like 35 519 IPR016161 GO:0016491(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1872 Cam-Chr1:32241774 Cam09g1553 Cam-Chr9:26092875 1.50E-192 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1553 K00140 - csv:101204924 1015.76