Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1663 ATGGCGAAAGTTGGTTTCATTTTAGTTGTATATGTGGAGGTGTTGCTTAGCTTGGCCGCCACCGCCGTGCATGGCCAAGGCACACGCTTCGATTTTTATCGCGACACGTGCCCTGAAGTCGAATTCATCGTTCGATCCACCGTTCGATCCCATTTTCGATTGGATCCCTCAATTGCTCCTGGGTTATTGAGAATGCACTCACATGACTGCTTTGTTCGAGGATGTGATGCTTCTGTACTTCTTTCCGGTCCCAATTCTGAAAGGACGGCTGTGCCTAACCGTACTTTGAAAGGGTTTAAGGTTATTGACGATGCCAAGTCACAACTTGAGGATGTTTGCCCGGGTGTCGTGTCGTGCGCTGATATTCTTGCTCTTGCTGCTCGTGACTCAGTGGTTCTGACGGGTGGATTAGGTTGGGAAGTTCCGACGGGACGAAGAGATGGTAGAGTTTCATTGGTTTCAGAGGTGAAGTTGCCTGGTTTTTCAGATTCCATTGAAGTTCAGAAGGAGAAGTTTAGGTCTATGGGTCTCAACACACATGACCTTGTCACTCTCGCAGGTGCCCATACCATCGGTACGGCGTCATGTCGTTTTTTCAGTTACAGACTCTACAACTTCACCACGGTGACTGAAAGCGGCGCTGATCCGACCCTTAACCCGTCGCTTGTCGGTCGGCTACGAGAACTTTGCCCTGAAGACGGAGATGGCTCAAACAGAGTCAAACTCGACATGGATAGTCCCGAACAATTCGACTTGTCGTTCTACAAAAACTTGAGACATGGAGGAGGGATCTTGGAGTCTGATCAAATGCTGTGGAATGATGACTCCACTCGCCCTATCGTCCGACATTACTTGGGTATGAGAATTTTAAGAGGGCGTTCTAGCTTTAGAGTTGAGTTTGGAAGATCCATGGTTAAAATGAGCAATGCACAAGTTAAAACTGGCATTGTTGGTGAAATTCGAAGGGTTTGCTCTGAGGTTAATTGA 987 47.72 MAKVGFILVVYVEVLLSLAATAVHGQGTRFDFYRDTCPEVEFIVRSTVRSHFRLDPSIAPGLLRMHSHDCFVRGCDASVLLSGPNSERTAVPNRTLKGFKVIDDAKSQLEDVCPGVVSCADILALAARDSVVLTGGLGWEVPTGRRDGRVSLVSEVKLPGFSDSIEVQKEKFRSMGLNTHDLVTLAGAHTIGTASCRFFSYRLYNFTTVTESGADPTLNPSLVGRLRELCPEDGDGSNRVKLDMDSPEQFDLSFYKNLRHGGGILESDQMLWNDDSTRPIVRHYLGMRILRGRSSFRVEFGRSMVKMSNAQVKTGIVGEIRRVCSEVN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 28687548 28689654 + CaPI482276_09g016630.1 Cam09g1663 135992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1663 328 ProSiteProfiles Plant heme peroxidase family profile. 27 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 FunFam Peroxidase 159 307 - -
Cam09g1663 328 SUPERFAMILY Heme-dependent peroxidases 29 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cam09g1663 328 Gene3D Peroxidase, domain 2 159 307 - -
Cam09g1663 328 Pfam Peroxidase 44 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 Gene3D - 31 328 - -
Cam09g1663 328 CDD secretory_peroxidase 29 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam09g1663 328 PANTHER PEROXIDASE 25-RELATED 19 324 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cam09g1663 328 FunFam Peroxidase 31 174 - -
Cam09g1663 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1663 328 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1663 Cam-Chr9:28687548 Cam09g1701 Cam-Chr9:29963728 2.10E-72 dispersed
Cam09g1663 Cam-Chr9:28687548 Cam09g1665 Cam-Chr9:28722119 5.20E-119 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1663 K00430 - csv:101202985 580.096