Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1665 ATGACAAAACTTCGTTTTAATTCAATGCTCGTCTTGGTTCTGTCTGTCGCAGTGCTATTCACCTTTTGTAGCACCCTCGTGCATGGCCAAGCTACACGCATTGGCTTCTACTCCAACTCTTGCCCTCAAGTCGAGTCCATTGTTGCATCAACAGTCCGATCTCATTTTCAATCTGACCCTAGAATTGCTCCAGGTTTGTTAAGAATGCACTTCCATGACTGTTTCGTTCGGGGTTGTGATGCTTCTGTGCTTCTTGCTGGCTCCAATAGCGAGAGGACTGCGCCGCCCAACCTTTCGTTAAATGGGTTTGAAGTGATTGATGATGCTAAGTCTCAGCTCGAAGCTGCTTGTCCTGGCATTGTATCTTGTGCTGACATTCTTGCTCTTGCCGCCCGTGACTCTATAGTTTTGACAAGTGGACTACGTTGGTCAGTGCCCACAGGACGAAGAGATGGCACAATTTCTTTGGCTTCAGAAGCTAACAACTTGCCTGGATTTACAGATTCAATTGACGTTCAAAAGCAAAAATTTAGCGACAAAGGTCTCAACACTCAAGATCTTGTCACTCTTGTGGGTGGACACACAATTGGCACAACACAATGCCAATTTTTCAACTACAGACTCTTCAACTTCACAAACAATGGACCAGATCCAAGCATGGACCCAGCGTTCGTGACTCAGATGCAAGCGCTGTGCCCTCAGAACGGCGACGGTAGCCGCAGGGTTGCATTGGACACAGGCAGCGCCGGGCGGTTCGACACCATGTTCTTCTCAAACTTGAGGAACGGACGTGGGGTTTTGGAGTCTGATCAAAAGCTATGGACCGACGCTTCCACTCGCACTTTTGTCCAACGCTTTCTGGGTTTGAGAGGCGTCTTGGGTTTGACCTTCAATCTTGAGTTTGGGAAATCTATGGTTAAGATGAGTAACATTGAAGTTAAGACTGGAACTCAAGGAGAAATTCGGAAAGTTTGTTCTGCAGTTAACTAG 990 47.07 MTKLRFNSMLVLVLSVAVLFTFCSTLVHGQATRIGFYSNSCPQVESIVASTVRSHFQSDPRIAPGLLRMHFHDCFVRGCDASVLLAGSNSERTAPPNLSLNGFEVIDDAKSQLEAACPGIVSCADILALAARDSIVLTSGLRWSVPTGRRDGTISLASEANNLPGFTDSIDVQKQKFSDKGLNTQDLVTLVGGHTIGTTQCQFFNYRLFNFTNNGPDPSMDPAFVTQMQALCPQNGDGSRRVALDTGSAGRFDTMFFSNLRNGRGVLESDQKLWTDASTRTFVQRFLGLRGVLGLTFNLEFGKSMVKMSNIEVKTGTQGEIRKVCSAVN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 28722119 28724130 - CaPI482276_09g016650.1 Cam09g1665 135994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1665 329 CDD secretory_peroxidase 33 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam09g1665 329 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 Gene3D Peroxidase, domain 2 164 308 - -
Cam09g1665 329 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 Gene3D - 36 329 - -
Cam09g1665 329 FunFam Peroxidase 164 308 - -
Cam09g1665 329 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cam09g1665 329 PANTHER PEROXIDASE 25-RELATED 20 325 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cam09g1665 329 Pfam Peroxidase 48 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 ProSiteProfiles Plant heme peroxidase family profile. 31 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1665 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cam09g1665 329 FunFam Peroxidase 35 177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1227 Cam-Chr1:20565666 Cam09g1665 Cam-Chr9:28722119 1.30E-69 dispersed
Cam06g1229 Cam-Chr6:23613351 Cam09g1665 Cam-Chr9:28722119 1.30E-105 dispersed
Cam06g1231 Cam-Chr6:23627345 Cam09g1665 Cam-Chr9:28722119 6.90E-108 dispersed
Cam08g1884 Cam-Chr8:24838016 Cam09g1665 Cam-Chr9:28722119 2.20E-66 dispersed
Cam09g0470 Cam-Chr9:4905241 Cam09g1665 Cam-Chr9:28722119 7.00E-63 dispersed
Cam09g1665 Cam-Chr9:28722119 Cam09g1701 Cam-Chr9:29963728 1.90E-76 dispersed
Cam09g1663 Cam-Chr9:28687548 Cam09g1665 Cam-Chr9:28722119 5.20E-119 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1665 K00430 - csv:101217567 572.007