Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1672 ATGAGCGGACGAATCGTGAGCGATGAAGGAATGGGACAAGCAGAGCAGAGAAACGAAGCGTTGAACATTGGATCACCCTCAAAGGTGGGTGTGCCGCCGAAGAAGAACGTGTGGGAAGAGTTTAATTCTGTGGTGAAAGAGACGTTTTTCTCTGATCAGCCTCTTCGTCATTTCAAAGACCAACCTAAGCATAAGAAGGTTGCTCTCTTTGTCCAAGGTCTCTTCCCCATATTCCAATGGGGAAGGGGATATAACTTTAGTAAGTTCAAAGGGGATCTCATTGCTGGCTTAACCATTGCTAGTCTCTGCATTCCTCAAGACATTGGATATGCCAAGCTCGCTAATTTACCTCCTGAAAATGGACTTTATAGTAGTTTTGTCCCGCCGTTGGTATACGCGGTGATGGGGAGCTCTAGGGATATTGCAATCGGCCCCGTTGCTGTGGTGTCGCTTTTGCTGGGGACCCTGCTAGGGCAGGTGTACGACCCGGTGAAAGAGGTGGAGCAATACAAACGGCTGGCTTACACGGCAACTTTCTTCGCCGGAGTAACTCAGTTGGCTCTAGGGTTCCTCCGGCTCGGATTCTTGATTGACTTTCTGTCGCACGCCGCGGTTGTCGGGTTCATGGGAGGTGCGGCCGTCACCATCGCCCTTCAGCAGCTGAAAGGTCTTCTTGGCATAGTAAACTTCACCAAGAAAACTGATATAATTTCTGTGATGCGCTCTGTTTGGAGTAATGTGCACCATGGGTGGAACTGGGAGACTATACTCATAGGCGTTTCATTTCTGGCCTTTCTTTTGGCTACAAAATACATCGGCAAGAAATACAAGAAACTGTTCTGGATTCCAGCCATTGCCCCCTTAACATCTGTTATACTTTCCACATTTTTGGTGTACATTACTCGAGCAGATAAACATGGAGTTCAGATTGTAAGACACTTAGATAAAGGAATAAATCCACCATCCCTTGATAAGATATTCTTCCATGGAGACGATCTCACCCAAGGTTTCAAGATTGGAGTGGTTGCTGGTTTGATTGGCCTAACGGAAGCAGTGGCAATTGCAAGAACATTTGCAGACCTAAAAGACTATGAGATTGACGGTAACAAAGAAATGATGGCTCTTGGAACCATGAACATTGCTGGCTCCATGACTTCTTGCTATGTAGCCACAGGATCATTCTCTCGGTCGGCCGTGAACTACATGGCCGGCTGCAACACTCCGATGTCGAACATCGTCATGGCATGCGTCGTTCTCTTGACATTAGAGCTCATCACGCCCCTTTTCAAGTACACCCCTAATGCCATTCTCGCCTCCATCATTATCTGCGCCGTCATCGGTCTCATCGACATCGATGCCGTGATTTTGCTTTGGAAGATCGACAAATTCGACTTCATTGCCTGCATGGGAGCTTTCTTCGGTGTCATCTTTGATTCTGTTGAGATTGGTCTTCTCATTGCTGTTAGTTTGTCATTGTCCAAAATTCTATTGCAAGTAACAAGACCGAGAATTGCGTTGCTTGGGAAGCTCCCAAAGATTCCTATTTTTAGAAACATTTTGCAGTACCCTGGGGCAAAGAAGATTGCAGGAGTTCTAATGGTTAGGGTTGATTCTTCAATATACTTCTCCAATGCCAATTATGTCAAAGAAAGGATACTGAGATGGCTGGCAGATGAAACAGAGAAGCTAGAAGACCAATCTTTGCCAATCAAAGTCGTGGTCGTCGACATGTCTCCCGTATCCGATATCGACACGAGTGGCATCCATGCCTTGGAGGGTTTGCACTCCCATTTGCATAAGAAGGAAATTGCCCTTGCACTTGCAAATCCAGGCCCAGTGATCATGGAGAAGCTCTTAGCTTCAAACTTTGATAAGCTCATTGGAGAAGACAACATTTTCCTCAGTGTTAACGAAGCTATTAAGATTTATGCCCCAGATGCTGTTCTTGATCCTTAA 1956 46.06 MSGRIVSDEGMGQAEQRNEALNIGSPSKVGVPPKKNVWEEFNSVVKETFFSDQPLRHFKDQPKHKKVALFVQGLFPIFQWGRGYNFSKFKGDLIAGLTIASLCIPQDIGYAKLANLPPENGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLGQVYDPVKEVEQYKRLAYTATFFAGVTQLALGFLRLGFLIDFLSHAAVVGFMGGAAVTIALQQLKGLLGIVNFTKKTDIISVMRSVWSNVHHGWNWETILIGVSFLAFLLATKYIGKKYKKLFWIPAIAPLTSVILSTFLVYITRADKHGVQIVRHLDKGINPPSLDKIFFHGDDLTQGFKIGVVAGLIGLTEAVAIARTFADLKDYEIDGNKEMMALGTMNIAGSMTSCYVATGSFSRSAVNYMAGCNTPMSNIVMACVVLLTLELITPLFKYTPNAILASIIICAVIGLIDIDAVILLWKIDKFDFIACMGAFFGVIFDSVEIGLLIAVSLSLSKILLQVTRPRIALLGKLPKIPIFRNILQYPGAKKIAGVLMVRVDSSIYFSNANYVKERILRWLADETEKLEDQSLPIKVVVVDMSPVSDIDTSGIHALEGLHSHLHKKEIALALANPGPVIMEKLLASNFDKLIGEDNIFLSVNEAIKIYAPDAVLDP 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 29024442 29031327 - CaPI482276_09g016720.1 Cam09g1672 136001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1672 651 Pfam Sulfate permease family 89 470 IPR011547 GO:0016020(InterPro)
Cam09g1672 651 PANTHER SULFATE TRANSPORTER 62 641 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam09g1672 651 SUPERFAMILY SpoIIaa-like 526 642 IPR036513 -
Cam09g1672 651 NCBIfam sulfate permease 76 639 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam09g1672 651 Pfam STAS domain 523 639 IPR002645 -
Cam09g1672 651 ProSiteProfiles STAS domain profile. 521 643 IPR002645 -
Cam09g1672 651 Gene3D STAS domain 516 646 IPR036513 -
Cam09g1672 651 MobiDBLite consensus disorder prediction 1 28 - -
Cam09g1672 651 CDD STAS_SulP_like_sulfate_transporter 522 636 - -
Cam09g1672 651 FunFam Sulfate transporter 31 501 645 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0910 Cam-Chr3:11733714 Cam09g1672 Cam-Chr9:29024442 1.40E-163 dispersed
Cam09g1672 Cam-Chr9:29024442 Cam11g0135 Cam-Chr11:2973139 1.80E-176 dispersed
Cam09g1672 Cam-Chr9:29024442 Cam11g1556 Cam-Chr11:28362295 1.10E-248 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1672 K17470 - csv:101202746 1179.47