Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1701 ATGGCGAAGTTGATGATTCTTCTCAATCTCTTCATGTTCCTTGCTTGCTTTGCATCCATTTCTCAAGCCCAATTGAAATTTGGATTCTATGCTCGATCTTGTCCTTCCGCTGAATCCGTTGTTCGTAGCGTCGTAAACAACGCCGTTCAAAACAATGCCAACATGGCCGCCGTATTGCTCCGCCTCCACTTCCATGACTGTTTTGTCGAGGGTTGCGATGGTTCAATCTTAATTGACAACGGGCCGAGATCGGAGAGACTTGCATTTGGGCATCAAGGAGTAGGGGGTTTCGAGGTAATAGAAAGAGCAAAAGGAGAATTAGAAGCACAATGTCCTGAGGTGGTTTCTTGTGCTGACATTGTGGCTATGGCGGCTAGAGATGCTATTGTTATGGCAAATGGACCGGATTACGAGGTTCTGACCGGTCGGAGAGACGGTAGGGTTTCGGATATTTCTCTGGCGGATGAGCTGCCGGATGTGAGTGATTCAGTTCAAGTTTTGAAGAACAAATTTGCTCAGAAAGGGATGAGCGATAAGGACTTGGTTTTACTCACTGCGGCCCACACAATCGGAACAACCGCATGCTTCTTCATGACAAAACGCCTCTACGACTTCTTCCCGGGAGGCGGCGGCGGATCGGACCCGGACATAAGCCCGACATTGCTGCCGGAGTTGAAGTCACAATGTCCTCGAAATGGCGACGTCAATGCCCGCCTTGGCATCGACCGTGGCAGCCCCCGCACCTTCGACATTAGCATTCTTCAAAACATAAGAAATGGCTTCGCCATCCTCGCCTCCGATGCCCGTCTAAATGACGACCCATCCACCCGAGCCGTCATCGACTCGTACTTGAGCCCCCTCGCCCCCATCCTTGGCCCCTCATTTCAGGATGATTTTATCAACTCCATTGTGAGAATGGGTCAGATTGGGACCAAAACTGGCTCTCAAGGAGAGATTCGAAGGGTTTGTTCTGCTTTTAACTCAAGGTAA 990 50.1 MAKLMILLNLFMFLACFASISQAQLKFGFYARSCPSAESVVRSVVNNAVQNNANMAAVLLRLHFHDCFVEGCDGSILIDNGPRSERLAFGHQGVGGFEVIERAKGELEAQCPEVVSCADIVAMAARDAIVMANGPDYEVLTGRRDGRVSDISLADELPDVSDSVQVLKNKFAQKGMSDKDLVLLTAAHTIGTTACFFMTKRLYDFFPGGGGGSDPDISPTLLPELKSQCPRNGDVNARLGIDRGSPRTFDISILQNIRNGFAILASDARLNDDPSTRAVIDSYLSPLAPILGPSFQDDFINSIVRMGQIGTKTGSQGEIRRVCSAFNSR 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 29963728 29969562 - CaPI482276_09g017010.1 Cam09g1701 136030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1701 329 CDD secretory_peroxidase 24 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam09g1701 329 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 SUPERFAMILY Heme-dependent peroxidases 24 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 FunFam Peroxidase 158 306 - -
Cam09g1701 329 FunFam Peroxidase 28 175 - -
Cam09g1701 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cam09g1701 329 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 PANTHER PEROXIDASE 25-RELATED 17 323 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cam09g1701 329 ProSiteProfiles Plant heme peroxidase family profile. 24 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam09g1701 329 Gene3D Peroxidase, domain 2 158 306 - -
Cam09g1701 329 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Cam09g1701 329 Gene3D - 28 327 - -
Cam09g1701 329 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cam09g1701 329 Pfam Peroxidase 41 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1663 Cam-Chr9:28687548 Cam09g1701 Cam-Chr9:29963728 2.10E-72 dispersed
Cam09g1665 Cam-Chr9:28722119 Cam09g1701 Cam-Chr9:29963728 1.90E-76 dispersed
Cam09g1701 Cam-Chr9:29963728 Cam11g0736 Cam-Chr11:9148457 1.30E-56 dispersed
Cam09g1701 Cam-Chr9:29963728 Cam02g0188 Cam-Chr2:2812730 6.00E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1701 K00430 - csv:101221831 523.087