Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1774 ATGCTAATTCATCTCTTTCTTTTCCTCTGTTTCACTCTTTCAGTCAACCCAATTTCTTTCAAAATAGATCAATTCCTATGGAACGAAGATCGAATAGCTTTTCAAGGAGATGCATTTCTCTCTGATCGTGGGATTCAATTCAGCCACTCCGTTTATCATTGCCAAGTGGGTCAAGCAATCTACAGAGATATTGTTCCAATTTGGGACATTGAAAAAGGAAAACTCACTGATTTCTCCACCCATTTCGCCTTCTCTATTGATACCCAAAATAACAAAACTTATGGCAGTGGGATTGTTTTCTTCTTAGCTCCAGTTGGGTTTCAAATCCCCATCAACTCAGCTGCAGGTTTCTTTGGCCTTTACAACAAGACTTACATGAATTCATCCCAAAACCAAATTCTTCATGTTGAATTTGATTCTCATGCAGATCCTGATTGGGATCCTTCATATCAACATGTGGGTATAAACATTAACTCTGTTACTTCTTCTATTCTCACTCCTTTGAATGTTAGCTTTCACAGTGGAGACATTGCTGATGTGTGGATCTCCTACAATTCAACCACCAAAAATTTTACTGTCTCATGGAAATGGAAATCCACCTCGAATTCATTTGAAGATACCACCTTGAGTTATAAGATTGATTTAACCACGATTCTTCCTCAATGGGCGGTGGTGGGATTTGCAGGGGCAACAGGAACAAACTTCGAGAGACATACTCTGTTTTCATGGGAGTTCAACTCGAGCTTGGATATAAAGCAAACAAGTAAAAATAATGGGAATATAGTTAATATAGTTGTGGGAGTAACGGTTTCAGTTGGAGTTTTTATTATTATAGTCATAACAACAATATTTGTAGTAATGTGTAAATTGAAACAGAGGAAGAAAACAGGGGAGGAAGTAAATTTGACAAGCATGAACCAAGATTTGGAAAGAGAAGCTGGACCCAGAAGGTTTTCTAGCAAGCTTCTTGCGATGGCAACCAATAACTTCTCAAATGAAAGAAAGCTAGGGGAAGGAGGATTTGGAGCAGTGTACAGAGGGTATATACCAGATATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTTCAAGACAGGGGAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTCGGCTTCGCCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTATGAATTCATGCCAAATGGTAGTCTTGATTCTCATCTCTTTGGTAAGAGAACCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCTTCTGCATTGCTATATCTCCATGAAGAATGGGAACAATGCGTGGTTCATAGAGACATTAAACCTAGCAATGTCATGTTAGATTCAAATTTCAATGCTAAATTGGGAGATTTCGGTCTAGCTCGATTAATGGACCATGAGTTGGGTGGTCAAACAACTAGGCTCGCAGGGACTTTTGGTTATTTAGCCCCTGAATATGTAACCACAGGCAGAGCTAGTAAAGAATCTGATGTGTTTAGTTTTGGGGTTGTTGCTTTGGAGATTGCTACAGGAAGAATGTCAAGAACTTGCATTGATCAAGATGAATCTTACAAAGGATTAGTAGAATCAGTTTGGGATCTGTATGAAAGTGGGCAATTGCTAGTGGGGATGGATGAGAAATTGCAATCTAAGTATGATGAAAAAGAGGCTGAGTGTTTGATGATGGTTGGATTATGGAGTTCTTATCCTGACCCTAATCTTAGACCTTCCATGAAACAAGCAATTCAAGTTCTTAATTTTGAGAGAAATATGCCAAATCTTCCAAGTAAAATGCCACTTGCTTTTTATAACGCTCCATCCACATCAATCAACTCAAACCAACCTTCCAAACATTACTCCAAGTCTTGGTCACATGTGTCTTCCTTGAAAACCCAATGA 1944 38.99 MLIHLFLFLCFTLSVNPISFKIDQFLWNEDRIAFQGDAFLSDRGIQFSHSVYHCQVGQAIYRDIVPIWDIEKGKLTDFSTHFAFSIDTQNNKTYGSGIVFFLAPVGFQIPINSAAGFFGLYNKTYMNSSQNQILHVEFDSHADPDWDPSYQHVGININSVTSSILTPLNVSFHSGDIADVWISYNSTTKNFTVSWKWKSTSNSFEDTTLSYKIDLTTILPQWAVVGFAGATGTNFERHTLFSWEFNSSLDIKQTSKNNGNIVNIVVGVTVSVGVFIIIVITTIFVVMCKLKQRKKTGEEVNLTSMNQDLEREAGPRRFSSKLLAMATNNFSNERKLGEGGFGAVYRGYIPDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFGKRTPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKPSNVMLDSNFNAKLGDFGLARLMDHELGGQTTRLAGTFGYLAPEYVTTGRASKESDVFSFGVVALEIATGRMSRTCIDQDESYKGLVESVWDLYESGQLLVGMDEKLQSKYDEKEAECLMMVGLWSSYPDPNLRPSMKQAIQVLNFERNMPNLPSKMPLAFYNAPSTSINSNQPSKHYSKSWSHVSSLKTQ 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31723073 31725016 + CaPI482276_09g017740.1 Cam09g1774 136103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1774 647 PANTHER - 35 610 IPR050528 GO:0005886(PANTHER)
Cam09g1774 647 FunFam L-type lectin-domain containing receptor kinase IX.1 315 406 - -
Cam09g1774 647 MobiDBLite consensus disorder prediction 626 647 - -
Cam09g1774 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 250 IPR013320 -
Cam09g1774 647 ProSitePatterns Protein kinases ATP-binding region signature. 336 360 IPR017441 GO:0005524(InterPro)
Cam09g1774 647 Pfam Protein kinase domain 331 598 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1774 647 SUPERFAMILY Protein kinase-like (PK-like) 314 634 IPR011009 -
Cam09g1774 647 Pfam Legume lectin domain 19 258 IPR001220 GO:0030246(InterPro)
Cam09g1774 647 Gene3D - 16 272 - -
Cam09g1774 647 SMART serkin_6 330 600 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1774 647 CDD lectin_legume_LecRK_Arcelin_ConA 18 249 IPR001220 GO:0030246(InterPro)
Cam09g1774 647 Gene3D Phosphorylase Kinase; domain 1 315 406 - -
Cam09g1774 647 ProSiteProfiles Protein kinase domain profile. 330 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1774 647 CDD STKc_IRAK 336 601 - -
Cam09g1774 647 Gene3D Transferase(Phosphotransferase) domain 1 407 622 - -
Cam09g1774 647 FunFam Lectin-domain containing receptor kinase A4.3 407 620 - -
Cam09g1774 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0869 Cam-Chr3:10632199 Cam09g1774 Cam-Chr9:31723073 1.80E-17 dispersed
Cam09g1774 Cam-Chr9:31723073 Cam10g0803 Cam-Chr10:15921734 6.70E-163 dispersed
Cam09g1770 Cam-Chr9:31694166 Cam09g1774 Cam-Chr9:31723073 2.20E-262 proximal
Cam09g1774 Cam-Chr9:31723073 Cam09g1775 Cam-Chr9:31730791 8.50E-267 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85452 PF00069 Pkinase 4.20E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1774 - - - 0.0