Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1775 ATGGCTACTTCCTCCTATGTCTTTCCAATGTCAAGTCATCTCCTTTTCCTTCTCCTTCTTCTTTCCTTTCTTCCTCCCTCCATTCACTCAATTTCTTTCCAAATAGATCGGTTCAAGACCAATGAAAGTGATGCACTTTACCAAGGAGATGCCCTTCCTTCAGTTGGATTAGTTGAATTCAACAATGTTAATTATCTTTGTAGAGTTGGTTGGATTATCTACAAAGACATTGTGCCAATTTGGGACTCTAAAACAGGAAAAACCACTGATTTTACAACCCACTTCACCTTCTTAATAGATACCCAAAATGTTCAAAACTATGGCCATGGAATAGCTTTCTTTCTAGCTCCAATTGGGTTCCAAATCCCTCCAAACTCAGCTGGTGGCTTTCTTGGCCTTTTCAACACCACAAATAGTGATTCAACCATCAACCAAATTGTCCATGTTGAATTTGATTCTTTCTCCAATCAAGAATGGGATCCTCCATATGAACATGTGGGCATAAATGTTAACTCCATTGCTTCTTCTAATTACACTCGTTGGAATGCTAGTTTACATAGTGGAGATATTGCTGATGTGTGGATCTCCTATAATTCAACTACAAAAAACTTGAGTGTTTGGTGGAAATACCAAAGTGGGTCAAATTCTTCTGAGAATACAACTCTAAGTTACCAAATTGATCTCATGAAGGTTCTTCCTCAATGGGCTACAATAGGATTTTCAGCTGCAACTGGAATGTATGTAGAGAGACATACATTATTTTCATGGGAATTCAACTCCACCTTGGATATAAACAAAGCAAGTGAAGATAATGGGAATAAAGTTAATGTAATTGTGGGTGTGACTGTTTCAATAGGAGTTTCAATTCTCATAGCAATTATAGCCTTTGTAGTACTTTGGAGATTGAAACAAAAGAAAAGAAAATCAGAAGAAGAAAAGTCTGAGGAGGTAAACTTGACATCCATTAATGATGATTTGGAAAGAGGGGCTGGACCCAGAAGGTTTTCTCATAAGCTACTAGCCATGGCTACCAACAACTTCTCCAATGAAAGGAAGCTTGGTCAAGGAGGATTTGGAGCAGTGTACAGAGGGTACATACCAGACATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTTCAAGACAGGGGAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTCGGCTTCGCCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTATGAATTCATGCCAAATGGTAGTCTTGATTCTCATCTCTTTGGTAAGAGAACCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCCTCTGCGTTGCTATATCTCCATGAAGAATGGGAACAATGCGTGGTTCATAGAGACATTAAATCAAGTAATGTGATGTTGGATTCAAACTTCAATGTCAAGCTTGGGGATTTTGGGTTAGCTAGATTAATGGACCATGAGTTGGGAGCTCAAACAACTGGGTTGGTTGGAACTTTGGGCTACTTAGCTCCAGAATATATAAGCACAGGCAGAGCTAGTAAAGAATCTGATGTGTTTAGTTTTGGGGTTGTTGCTTTGGAGATTGCTACTGGAAGAATGTCAAGAACCTCCATGGATACAGAATCTCATAAGGATTTGGTGGAGTGGGTTTGGGATCTTTATGGGAGTGGACAATTGATTGATGGCATGGATGAGAAATTGATGAAGTCTGATTATGACCAAAAACAAATAGAGTGTTTGATGCTTGTTGGACTTTGGAGTGCTTATCCTGACCCTAATTTAAGACCTTCAATAAGACAAGTAATTCAAGTTCTTAATTTTGAGACAACAATGCCAAATCTTCCAAGTAAAATGCCTGTTGCTGTGTATCATGCTCCTTCCACATCAATGAGCTCAAATGAACCAACAATTACTGCAAGTCTTGATGTGGGTCGTTGA 1974 39.16 MATSSYVFPMSSHLLFLLLLLSFLPPSIHSISFQIDRFKTNESDALYQGDALPSVGLVEFNNVNYLCRVGWIIYKDIVPIWDSKTGKTTDFTTHFTFLIDTQNVQNYGHGIAFFLAPIGFQIPPNSAGGFLGLFNTTNSDSTINQIVHVEFDSFSNQEWDPPYEHVGINVNSIASSNYTRWNASLHSGDIADVWISYNSTTKNLSVWWKYQSGSNSSENTTLSYQIDLMKVLPQWATIGFSAATGMYVERHTLFSWEFNSTLDINKASEDNGNKVNVIVGVTVSIGVSILIAIIAFVVLWRLKQKKRKSEEEKSEEVNLTSINDDLERGAGPRRFSHKLLAMATNNFSNERKLGQGGFGAVYRGYIPDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFGKRTPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMDTESHKDLVEWVWDLYGSGQLIDGMDEKLMKSDYDQKQIECLMLVGLWSAYPDPNLRPSIRQVIQVLNFETTMPNLPSKMPVAVYHAPSTSMSSNEPTITASLDVGR 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31730791 31732764 - CaPI482276_09g017750.1 Cam09g1775 136104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1775 657 FunFam L-type lectin-domain containing receptor kinase IX.1 332 423 - -
Cam09g1775 657 CDD STKc_IRAK 353 618 - -
Cam09g1775 657 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1775 657 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524(InterPro)
Cam09g1775 657 SUPERFAMILY Protein kinase-like (PK-like) 327 620 IPR011009 -
Cam09g1775 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 263 IPR013320 -
Cam09g1775 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1775 657 FunFam L-type lectin-domain containing receptor kinase IX.1 29 271 - -
Cam09g1775 657 SMART serkin_6 347 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1775 657 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Cam09g1775 657 PANTHER - 57 627 IPR050528 GO:0005886(PANTHER)
Cam09g1775 657 Gene3D Transferase(Phosphotransferase) domain 1 424 639 - -
Cam09g1775 657 Pfam Protein kinase domain 348 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1775 657 CDD lectin_legume_LecRK_Arcelin_ConA 31 262 IPR001220 GO:0030246(InterPro)
Cam09g1775 657 Gene3D - 28 287 - -
Cam09g1775 657 FunFam Lectin-domain containing receptor kinase A4.3 424 637 - -
Cam09g1775 657 Pfam Legume lectin domain 31 270 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1770 Cam-Chr9:31694166 Cam09g1775 Cam-Chr9:31730791 0.00E+00 dispersed
Cam09g1775 Cam-Chr9:31730791 Cam10g0803 Cam-Chr10:15921734 4.30E-181 dispersed
Cam09g1774 Cam-Chr9:31723073 Cam09g1775 Cam-Chr9:31730791 8.50E-267 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85453 PF00069 Pkinase 5.20E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1775 - - - 0.0