Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1929 ATGAAGGGAAGGGTAGATATGGTGGAAGTGAAAGAGAGAGGGGAAGGAAGGCTTCAGGAAGATATGGCGGTAAGTGGAAGAAGTTTGATGGAAGGAGTTCTCCCATTTCCGGCGATGATAGCGATGGAGTGTATCAACGTCGGTCTCAACACTCTTTTCAAAGCCGCCACCGCCGCCGGCATGAGCCACCACGTGTTCGTCGTCTATTCTTACTCTTTCGCCGCCCTTCTCCTCCTCCCTTCTCCCTTCATCTCTCGCAGATCCACTCGTCTTCCACCTCTCACTTTCTCTCTACTTTCGAAGATCGCTCTTCTCGGATTCATCGGTTCTTCTTCGCAGATTATGGGTTACACGGGAATCAATTACAGCTCTCCAACGCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTTGCCATCATCTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCCAAAGTGATGGGCACAATAATATCAATAATAGGTGCATTTGTGGTCACATTTTACAAAGGTCCAAGGATCATGTTCTCTTCAGAGCCCATTTCTCTTTCACTTCATCACCATCCACAACTATCTTCTTCAGATTCTGATTGGATCATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGATCTTCTTCTACAACTTAACTGTGGCCATCATAGCTGCAGTTGTAGGTGTGATTTTTGAGACAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTATTTGGATCATGTTTAAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCAGTGTTCGTAGCAATGTTTAAGCCGTTATCGATCGTTGTCGCTATCGTAATGGGAGTTCTGTTTCTTGGTGATTATCTATATCTTGGAAGTCTCATTGGAGCATCCATAATATCCATAGGGTTTTACACTGTAATGTGGGGAAAATCAAAAGAAGAAATGGGTGTTGGAGAAGAAAAAGAAGAAGACCATAGCCATAATCTTGATAGTAACAAGGAATCAAATGAAGATCAGAGAGTACCTCTTCTTGGAAGCTACAACACACAGAGATACAGTGCAGACCATGTATGA 1194 43.55 MKGRVDMVEVKERGEGRLQEDMAVSGRSLMEGVLPFPAMIAMECINVGLNTLFKAATAAGMSHHVFVVYSYSFAALLLLPSPFISRRSTRLPPLTFSLLSKIALLGFIGSSSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISIIGAFVVTFYKGPRIMFSSEPISLSLHHHPQLSSSDSDWIIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVIFFYNLTVAIIAAVVGVIFETDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDYLYLGSLIGASIISIGFYTVMWGKSKEEMGVGEEKEEDHSHNLDSNKESNEDQRVPLLGSYNTQRYSADHV 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 33982146 33987354 - CaPI482276_09g019290.1 Cam09g1929 136258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1929 397 MobiDBLite consensus disorder prediction 357 377 - -
Cam09g1929 397 PANTHER WAT1-RELATED PROTEIN 38 364 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam09g1929 397 Pfam EamA-like transporter family 47 176 IPR000620 GO:0016020(InterPro)
Cam09g1929 397 Pfam EamA-like transporter family 223 347 IPR000620 GO:0016020(InterPro)
Cam09g1929 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 72 179 - -
Cam09g1929 397 MobiDBLite consensus disorder prediction 378 397 - -
Cam09g1929 397 MobiDBLite consensus disorder prediction 357 397 - -
Cam09g1929 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1929 Cam-Chr9:33982146 Cam10g1234 Cam-Chr10:25757074 2.60E-72 dispersed
Cam09g1929 Cam-Chr9:33982146 Cam09g1930 Cam-Chr9:33995225 3.60E-66 tandem
Cam05g2708 Cam-Chr5:34439056 Cam09g1929 Cam-Chr9:33982146 3.00E-54 transposed
Cam10g1233 Cam-Chr10:25737891 Cam09g1929 Cam-Chr9:33982146 3.10E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1929 - - - 0.0