Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1936 ATGGATACAAGCTTGTTCAGGGGTCATCCTGAAAAGAGAGATTCATGGAGGACAATCTTCACTTTAGCTTATCAGAGTTTGGGGGTTGTTTATGGGGATTTAAGCACTTCTCCTTTGTATGTGTATAAAAGCACTTTTGCAGAGAACCTTCAGCACTCTGAGACTAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTTATAGTTCTTAGAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCATTGCTCTGTCGCCATGCTCGGTTGAGCTCTCTCCCAAATCACCAACTAGCGGATGAGGAGCTTTCTGCATATACAATTGACAGCCCACAAACTGAAAACACTACTAATTTTAGTTTTAGTTCTTGTCTGAAATCAACTTTGGAGAAATGTAAAGTTCTGCAAAAAATGTTGCTTGTTCTTGCTTTGATTGGGACTTGCATGGTTATTGGAGATGGTGTTCTCACACCAGCAATCTCAGTTTTTTCAGCTGTTTCTGGGCTTGAGTTATCCATGGCTAAGGAACATCACCAGTATATCGAAGTCCCTCTAGCGTGTGGCATATTGGTATTCTTATTCGCATTGCAACACTATGGAACGCATCAGGTTGGGTTCTTGTTTGCTCCAGTTGTAATTGTATGGCTTCTATGCATTAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCCCTGGTTTACAAAGCACTCTCGCCATACTACATGTATAAGTTCTTAAAAAAAACCAAAAAGCAAGGTTGGATGGCACTCGGCGGAATCCTCTTGTGTATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGGCACTTCTCACAGTTTTCTATCAAGCTTGCTTTCACTTTTGCGGTTTATCCATCCTTAGTTCTCGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGATAATGAATATCGGATCGGATTCTATGTTTCTGTTCCCGAGAAGGTAAGATGGCCAGTTCTTGCAATAGCAATACTTGCAGCAGTTGTGGGTAGTCAAGCGATCATCACCGGCACATTTTCGATCATCAAACAATGTTCTGCTTTGGGTTGTTTTCCAAGGGTAAAGATCATTCATACGTCTTCGAAAATACATGGCCAGATTTACATTCCCTTGATCAACTGGATACTAATGATATTGTGTTTGGCTGTTACCATTGGATTTAGAGACACAAAACGACTAGGCAATGCAGCAGGGTTGGCGGTTATTACTGTTATGCTCGTCTCAACATGTCTAATGTCACTCGTCATTGTATTATGTTGGCGTAAAAGTGTGTTGCTGGCCATAGCCTTCATACTCTTCTTTGGCTCCGTAGAAGCTCTCTACTTCTCTGCTTCTCTTATTAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGTTCTTTCATTGACCTTCCTTGTGGTTATGTATGTTTGGCACTATGGCACAGTGAAGAAATATGAAGCTGATGTTGAAAACAAAGTCCCTATAAATTGGCTCCTCAGTATAGGACCCAAAATTGGGATCGTTCGAGTCCGGGGGATCGGCCTTGTACATACCGAACTCGTTTCGGGGATCCCTGCCATTTTCTCTCATTTTGTCACCAACCTTCCAGCCTTTCATCAAATTCTAGTCTTCCTCTGCATCAAATCTGTCACAGTGCCTCATGTGAGGCCTGAGGAAAGGTTTTTAGTTGGACGAGTTGGGCCAAAGGAGTATCGACTCTACCGTTGCATCGCACGGTATGGCTATCGTGACATGCACAAGGACGACTTGGAGTTCGAGAGAGATCTTGCTTGCAGCATTGCAGAATTCATACGGTCCGAGAGAACAGAATGCAACAATTTTAGACACGAAGACTTGGACGACAATGAAAGAATGACAGTGATTGGGACTTCATCAACCCAACTAGACGGTATACAAATGTGTGAAAACGAAACATATGCTTCGCCAATCATGGGAACTTCAGAGATAATAAAGTCGGAGCAGTTGAGAAAAAGAGTTAGATTCGTTCTCCCCGAGAGTCCGAAAATGAACATCGATACGAGGGGAGAGTTGCAAGAGTTGATGGAGGCAAGGGAGGCAGGAATAGCATTTATAATGGGGCATTCATATGTGAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAGCTTGTGATTAATTATGGATATGATTTCTTGAGGAAAAATTCAAGAGGGCCCTCTTATGCTTTCAGCATTCCTTATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTTTAA 2325 41.98 MDTSLFRGHPEKRDSWRTIFTLAYQSLGVVYGDLSTSPLYVYKSTFAENLQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTIDSPQTENTTNFSFSSCLKSTLEKCKVLQKMLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFALQHYGTHQVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTKKQGWMALGGILLCITGSEAMFADLGHFSQFSIKLAFTFAVYPSLVLAYMGQAAYLSKHHNLDNEYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVITVMLVSTCLMSLVIVLCWRKSVLLAIAFILFFGSVEALYFSASLIKFFEGAWVPIVLSLTFLVVMYVWHYGTVKKYEADVENKVPINWLLSIGPKIGIVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDMHKDDLEFERDLACSIAEFIRSERTECNNFRHEDLDDNERMTVIGTSSTQLDGIQMCENETYASPIMGTSEIIKSEQLRKRVRFVLPESPKMNIDTRGELQELMEAREAGIAFIMGHSYVKAKKGSGWMKKLVINYGYDFLRKNSRGPSYAFSIPYASTLEVGMVYYV 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34047979 34051794 - CaPI482276_09g019360.1 Cam09g1936 136265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1936 774 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 774 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam09g1936 774 Pfam K+ potassium transporter integral membrane domain 22 521 IPR053951 -
Cam09g1936 774 NCBIfam potassium uptake protein 22 774 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cam09g1936 774 Pfam K+ potassium transporter C-terminal domain 534 772 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1395 Cam-Chr5:15789163 Cam09g1936 Cam-Chr9:34047979 4.80E-248 dispersed
Cam05g2716 Cam-Chr5:34512565 Cam09g1936 Cam-Chr9:34047979 0.00E+00 dispersed
Cam07g0504 Cam-Chr7:7227337 Cam09g1936 Cam-Chr9:34047979 5.00E-283 dispersed
Cam09g1936 Cam-Chr9:34047979 Cam11g0036 Cam-Chr11:1954642 1.00E-189 dispersed
Cam03g0058 Cam-Chr3:1525942 Cam09g1936 Cam-Chr9:34047979 2.80E-229 transposed
Cam10g1237 Cam-Chr10:25788990 Cam09g1936 Cam-Chr9:34047979 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1936 K03549 - csv:101218141 1506.12