Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1964 ATGCAGAATAACGCTGTATTGGCTTTGGCTATGTCTTTTTCCCCTAATTCTATTGCTACGGCTACTGCTATTCCATGCCCTAGCCGAAGCCCTAATTTCCCTCACTTTTCCCACATTCTTCAATTTCGTTCTCAATGTTCCATCTCATGGCGTTCTTCTTCATCCATCTCTCTTTTTTCTTCTCGATTTACTCCGAGGTTTCAGAAATTTGCCATAATGGCTGCTTCTGTGCCGGAGAGTGCCGGCGAGGCTGTGGAATCCGCTGATTTCGTTCATAATCTCCGGCTTGGTGCAATGTTTGGGGTTTGGTACCTTTTGAATATCTACTACAATATTTTCAACAAACAGGTTCTGAAAGCCTTTCCCTTTCCAACTACGGTCACAGCTTTCCAGTTCGGCTGTGGTACGGTCATAGTAAACTTAATGTGGGCTCTTCATTTTCACCATAGACCCAAGATCAATCGATCCCAGTTTGCTGCCATTCTTCCGCTGGCTGTAGCGCACACACTGGGAAACATATTAACCAATGTGAGTCTTGGGAGAGTTGCGGTTTCATTCACTCACACCATCAAAGCAATGGAGCCATTTTTCACTGTCCTTCTCTCTGCTTTGTTTTTGGCTGAGAGGCCCACATTTTGGGTTGTTTTTTCTCTGGTACCCGTTGTAGGAGGAGTGGCACTTGCTTCTTTCACTGAAGCCTCATTTAATTGGATTGGCTTCAGCAGTGCCATGGCTTCCAATCTTACCAATCAATCACGTAATATCTTCAGCAAAAAGTTCATGGTCCACAAAGAGGCATTGGACAATATCAATCTCTTCTCTGTACTTACTATCATTTCGTTTATCCTGTTGGTTCCCTCGGCCCTTCTCCTTGAAGGCAGTAAACTTAGTCCTTCATACCTGCAATTAGCGGCAAATCAAGGGTTGAATATCAGGGAGCTATGCATTAGGTTGCTTCTATCTGGCATCTGTTTCCATAGTTATCAGCAGGTTTCTTATTCAATACTACAGGAAATTTCACCAGTGAGCCATGCAGTAGGAAATTCTTTGAAGCGTGTGGTGGTTATAGTGTCCTCCGTTATTTTCTTCCAAACAGCAGTTTCACCTCTAAACGCCCTAGGAACTGGCATAGCTCTTGTGGGAGTTTTCTTGTATTCAAGGGCAAAGCGTATGAAGCCAAAGCTTAAGTCTTTGTAA 1197 43.78 MQNNAVLALAMSFSPNSIATATAIPCPSRSPNFPHFSHILQFRSQCSISWRSSSSISLFSSRFTPRFQKFAIMAASVPESAGEAVESADFVHNLRLGAMFGVWYLLNIYYNIFNKQVLKAFPFPTTVTAFQFGCGTVIVNLMWALHFHHRPKINRSQFAAILPLAVAHTLGNILTNVSLGRVAVSFTHTIKAMEPFFTVLLSALFLAERPTFWVVFSLVPVVGGVALASFTEASFNWIGFSSAMASNLTNQSRNIFSKKFMVHKEALDNINLFSVLTIISFILLVPSALLLEGSKLSPSYLQLAANQGLNIRELCIRLLLSGICFHSYQQVSYSILQEISPVSHAVGNSLKRVVVIVSSVIFFQTAVSPLNALGTGIALVGVFLYSRAKRMKPKLKSL 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34307235 34314617 - CaPI482276_09g019640.1 Cam09g1964 136293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1964 398 PANTHER SOLUTE CARRIER FAMILY 35 94 389 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cam09g1964 398 Pfam Triose-phosphate Transporter family 94 386 IPR004853 -
Cam09g1964 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 231 - -
Cam09g1964 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 94 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cam09g1964 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 311 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1627 Cam-Chr5:23270059 Cam09g1964 Cam-Chr9:34307235 5.00E-60 dispersed
Cam05g2562 Cam-Chr5:33385121 Cam09g1964 Cam-Chr9:34307235 1.10E-52 dispersed
Cam09g1964 Cam-Chr9:34307235 Cam10g0516 Cam-Chr10:7641485 8.00E-58 dispersed
Cam01g1427 Cam-Chr1:27793135 Cam09g1964 Cam-Chr9:34307235 3.10E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1964 K15283 - csv:101217436 671.389