Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g1981 ATGGGGTCCGGTAATGGGTTATGTTCAAAAGAGTTTGATTTGGATGCTAAGTGGCTGGTTGATCCGAAGCAAATCTTTGTTGGGCCAAGGATTGGGGAGGGCGCGCATGGCAAAGTGCACAAGGGGAAATATAAAGACCAAAATGTTGCAATTAAAATAATTCGGAAAGGTGAAACCCCAGAAGATATTGCCAAAACTGAGGCACGCTTTGCTCGGGAGGTTGCTATGTTATCCAGAGTTCAACACAAGAATCTTGCGAAGTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTGACTGAGCTTCTTTTAGGCGGTACATTAAGGAAGTACCTGTTGAGTATAAGGCCAAGGTGCTTGGACTTCAATGAGGCAGTTGGCTTTGCACTTGATATTGCACGTGCAATGGAATGCTTGCATTCGCATGGCATCATTCACCGTGACCTCAAGCCTGAGAATTTGATCTTGACTGCAGACCACAAAACCGTTAAACTTGCTGATTTTGGTCTTGCTAGAGAAGAGTCGGTAACAGAGATGATGACGGCTGAAACTGGGACTTACAGATGGATGGCTCCGGAGCTATACAGTACAGTAACTTTACGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATTGTATTCTGGGAGATTATCCAAAATAAGTTGCCTTTCGAAGGCATGTCAAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATTTACGACCGACTGCTGAGAACCTCCCACCGGATTTAGCACCTATTGTGACTTCCTGTTGGACAGAGGACCCAAACGATCGGCCTAACTTCAACCAAATCATACAAATGCTCTTGAAATGTCTATCCACCATTCCACAACCAGAGTATGTTGCACCACCACCATTGATGCACCCACCTGAGAATGCAGTTTTGCCACCAGAGTCTCCTGGAACAAGTTCTTTGATGGCAGCCACAAGACATGGCATGAGGGAAGTCCTGAACAGCGAGATGGAAGAGAAACCGAGTAGTTTCTTCTCGTGTTTCACTGGTAACTGTTATTGA 1065 44.69 MGSGNGLCSKEFDLDAKWLVDPKQIFVGPRIGEGAHGKVHKGKYKDQNVAIKIIRKGETPEDIAKTEARFAREVAMLSRVQHKNLAKFIGACKEPIMVIVTELLLGGTLRKYLLSIRPRCLDFNEAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPTAENLPPDLAPIVTSCWTEDPNDRPNFNQIIQMLLKCLSTIPQPEYVAPPPLMHPPENAVLPPESPGTSSLMAATRHGMREVLNSEMEEKPSSFFSCFTGNCY 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34470023 34472914 + CaPI482276_09g019810.1 Cam09g1981 136310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g1981 354 SMART serkin_6 25 292 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1981 354 PRINTS Tyrosine kinase catalytic domain signature 101 114 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1981 354 PRINTS Tyrosine kinase catalytic domain signature 139 157 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1981 354 PRINTS Tyrosine kinase catalytic domain signature 256 278 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1981 354 PRINTS Tyrosine kinase catalytic domain signature 213 235 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1981 354 ProSitePatterns Protein kinases ATP-binding region signature. 31 56 IPR017441 GO:0005524(InterPro)
Cam09g1981 354 SUPERFAMILY Protein kinase-like (PK-like) 17 321 IPR011009 -
Cam09g1981 354 PANTHER SERINE-THREONINE PROTEIN KINASE 20 286 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cam09g1981 354 Gene3D Transferase(Phosphotransferase) domain 1 106 297 - -
Cam09g1981 354 Gene3D Phosphorylase Kinase; domain 1 13 104 - -
Cam09g1981 354 ProSiteProfiles Protein kinase domain profile. 25 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g1981 354 Pfam Protein tyrosine and serine/threonine kinase 30 285 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1981 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g1981 354 FunFam Kinase suppressor of Ras 1 14 104 - -
Cam09g1981 354 CDD STKc_MAP3K-like 31 285 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1981 Cam-Chr9:34470023 Cam10g2233 Cam-Chr10:35605944 2.70E-113 dispersed
Cam10g1299 Cam-Chr10:26466765 Cam09g1981 Cam-Chr9:34470023 2.70E-150 wgd
Cam06g1889 Cam-Chr6:29923654 Cam09g1981 Cam-Chr9:34470023 4.70E-146 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85459 PF07714 PK_Tyr_Ser-Thr 2.10E-58 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g1981 - - - 0.0