Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2036 ATGGTTTTCTCTTCAGTTCCTGTGTTTCTTGATCCACCCAATTGGCCTTCTCAGCAACCAACTCAGCTACAAGGAAGTGGCTGTGAGACTAATAATGCTCAACACCTTCCACCTCCGGCACCGCCAACTAGCGGTGGCGGCGGTAGTGGACCTGGCTCGATTAGACCAGGGTCAATGACGGATCGAGCTAGGTTGGCGAAGATACCACAACCGGAAGCCGGGTTAAAATGTCCTAGATGCGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTACAGTCTCACTCAACCTCGCCACTTTTGCAAGACGTGCCGACGGTACTGGACGAGAGGTGGAGCGATGAGGAACGTACCGGTTGGAGGCGGGTGTCGGCGGTCGAGCAAGAGATCAAGCAAAGGAGGAAGCAATAGGTCAAAATCTCCAGGGGGTTCAAGCACTTCAACAAGCACAGTGTCATCAAATAGTTGCACAACAGACATAATTAGCCAACAACTGGGTCATCATCCTCCTCCTCCAACAACCCATTTGCCCTTTTTTTCTCAAAATTTACATCATCTTAGTGATTTTGGGAACCTTGGTTTAAACTTTGAAGCCCTTCAAATTCCTTCACTCCCATCATCAGCTGGAGGAGTTGAATCCTCAATTTTATCAAGTGGAATTACAGATCATCATCAATGGAAAATACCCTTTTTTGCAAATTTACATCAACAAAATGGGATGTATTCAAATTTCATGGCTGATCAAGATCATCATCATCATCAACAAGGAGCCGATTTTTCAAATTACCAGCGGTTGTCAAAGCCATTATTGGAGAGTGGATTCAATACTACTACTACTACAAATCATCATCAATTGGAGAATATTAATAATAATAATAATAATAGCATGAAAATCTTGGAGGAGACACAAGGGATTAACAATTTGTCAAGAAATTTTCTTGGAATTCAACCAAATGATGATCAATTCTGGAATTCTAGTACTACAACAACAACAACACCTGGGAATATTGCATGGAGTAGTGATCAAATTTCAGATCATTTCAATTCAACTTCTTCCACTACTCATCTCTTGGGTTGA 1080 42.04 MVFSSVPVFLDPPNWPSQQPTQLQGSGCETNNAQHLPPPAPPTSGGGGSGPGSIRPGSMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRSSKRSSKGGSNRSKSPGGSSTSTSTVSSNSCTTDIISQQLGHHPPPPTTHLPFFSQNLHHLSDFGNLGLNFEALQIPSLPSSAGGVESSILSSGITDHHQWKIPFFANLHQQNGMYSNFMADQDHHHHQQGADFSNYQRLSKPLLESGFNTTTTTNHHQLENINNNNNNSMKILEETQGINNLSRNFLGIQPNDDQFWNSSTTTTTTPGNIAWSSDQISDHFNSTSSTTHLLG 359
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 34913714 34915150 - CaPI482276_09g020360.1 Cam09g2036 136365
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2036 359 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cam09g2036 359 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 63 276 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam09g2036 359 Pfam Dof domain, zinc finger 75 129 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cam09g2036 359 MobiDBLite consensus disorder prediction 1 59 - -
Cam09g2036 359 MobiDBLite consensus disorder prediction 134 155 - -
Cam09g2036 359 MobiDBLite consensus disorder prediction 116 155 - -
Cam09g2036 359 MobiDBLite consensus disorder prediction 11 33 - -
Cam09g2036 359 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2036 Cam-Chr9:34913714 Cam10g0808 Cam-Chr10:16342245 5.10E-27 dispersed
Cam10g2068 Cam-Chr10:34456661 Cam09g2036 Cam-Chr9:34913714 1.50E-41 wgd
Cam02g2096 Cam-Chr2:33819555 Cam09g2036 Cam-Chr9:34913714 1.90E-39 wgd
Cam04g0898 Cam-Chr4:23100913 Cam09g2036 Cam-Chr9:34913714 3.20E-34 wgd
Cam07g0322 Cam-Chr7:4321424 Cam09g2036 Cam-Chr9:34913714 5.30E-44 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52645 PF02701 zf-Dof 4.60E-31 No_clan Cam TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2036 - - - 0.0