Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2037 ATGGCGGGAAAGGGAGAGGGTCCGGCCATCGGTATCGATCTCGGTACCACTTACTCTTGTGTTGGAGTTTGGCAGCATGATCGTGTTGAGATTATTGCCAATGATCAAGGAAATCGAACGACGCCGTCGTATGTTGCTTTCACTGATACCGAACGACTCATCGGCGACGCTGCCAAGAACCAAGTCGCTATGAATCCTCTCAACACTGTCTTCGATGCGAAGCGGTTGATTGGAAGGAGATTCTCCGATCCCTCGGTCCAGAGCGACATGAAATTGTGGCCATTCAAGGTCATTGCCGGTCCGGGGGACAAACCTATGATTGTCGTCAATTACAAAGGCGAAGAGAAGCAATTCGCCGCTGAAGAAATCTCATCCATGGTCCTTACGAAAATGCGTGAGATAGCAGAAGCTTACCTCGGTACCTCCGTGAAGAACGCCGTCGTCACCGTTCCTGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGACGCCGGAGTCATTGCCGGTCTTAATGTCATGCGGATCATCAACGAGCCTACAGCTGCTGCTATTGCTTATGGACTCGATAAAAAGGCGAGCAGTGTTGGCGAGAAGAATGTTCTGATTTTTGATCTGGGTGGAGGAACGTTTGATGTCTCTCTCCTCACAATTGAGGAAGGCATTTTCGAGGTGAAGGCAACTGCCGGTGACACCCATCTCGGCGGTGAGGATTTCGACAACAGATTGGTTAACCATTTTGTTCAAGAATTCAAGAGGAAGCATAAGAAAGACATCAGTGGAAATCCAAGGGCTCTCAGGAGATTGAGGACTGCTTGTGAAAGAGCCAAGAGAACCCTCTCATCCACTGCCCAAACTACAATCGAAATCGATTCTTTGTATGAAGGAATTGATTTCTACACAACCATTACTCGAGCTAGATTCGAAGAGCTCAACATGGACCTGTTTCGAAAGTGTATGGAGCCAGTTGAGAAGTGTTTGAGAGATGCAAAGATGGACAAAAGCAGCGTCCATGATGTTGTCCTTGTTGGTGGTTCTACAAGAATTCCCAAAGTGCAGCAGCTATTGCAAGATTTCTTCAATGGCAGGGAACTTTGCAAGAGTATCAATCCTGATGAAGCAGTTGCTTATGGAGCTGCTGTCCAAGCCGCCATCTTGAGTGGTGAAGGAAACGAGAAAGTGCAAGACCTTCTTCTCTTGGATGTTACTCCTCTATCACTTGGTTTGGAAACTGCAGGAGGTGTAATGACTGTTCTAATCCCAAGGAACACGACCATACCCACCAAGAAGGAACAAGTGTTCTCTACTTATTCGGATAACCAACCTGGTGTTCTTATTCAAGTCTACGAGGGTGAAAGGACAAGAACAAAAGATAACAATTTATTGGGCAAGTTTGAACTTTCTGGCATCCCTCCTGCTCCAAGAGGTGTTCCTCAGATCACTGTCTGCTTCGACATTGACGCCAACGGTATTCTAAACGTATCTGCAGAGGATAAAACTACAGGACAGAAGAACAAGATCACCATTACCAACGACAAAGGAAGGTTGTCCAAAGAAGAGATTGAGAAATTGGTTCAGGAAGCAGAGAAATTCAAGGCTGAGGATGAAGAACACAAGAAGAAAGTTGAATCAAAGAATGCTTTAGAAAACTATGCTTACAACATGAGGAATACCATCAAAGATGAAAAGATCGGTGGTAAACTTGCCCCAGCTGACAAGAAGAAGATCGAGGATGCAGTTGAACAGGCTATTCAGTGGCTAGATAGCAACCAGCTGGCTGAGTCGGATGAGTTTGATGACAAGATGAAGGAACTTGAGTCGATTTGCAACCCCATCATAGCCAAGATGTACCAAGGCGGTGCCGACATGGGTGGTGCGGCCATGGATGATGATGCTCCTCCTTCTGGTGGCAGTGGCGCTGGTCCTAAGATTGAAGAAGTCGATTAA 1947 46.64 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGTSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGRELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNALENYAYNMRNTIKDEKIGGKLAPADKKKIEDAVEQAIQWLDSNQLAESDEFDDKMKELESICNPIIAKMYQGGADMGGAAMDDDAPPSGGSGAGPKIEEVD 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34932090 34934520 + CaPI482276_09g020370.1 Cam09g2037 136366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2037 648 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cam09g2037 648 FunFam Heat shock 70 kDa protein 71 126 - -
Cam09g2037 648 Gene3D - 10 384 - -
Cam09g2037 648 PANTHER HEAT SHOCK PROTEIN 70KDA 9 582 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cam09g2037 648 FunFam Heat shock 70 kDa protein 197 260 - -
Cam09g2037 648 FunFam Heat shock 70 kDa 391 545 - -
Cam09g2037 648 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cam09g2037 648 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Cam09g2037 648 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 623 IPR029048 -
Cam09g2037 648 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cam09g2037 648 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cam09g2037 648 FunFam Heat shock 70 kDa protein 539 648 - -
Cam09g2037 648 FunFam Heat shock protein 70 10 196 - -
Cam09g2037 648 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cam09g2037 648 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cam09g2037 648 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Cam09g2037 648 Gene3D Actin; Chain A, domain 4 235 318 - -
Cam09g2037 648 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Cam09g2037 648 FunFam Heat shock 70 kDa 235 318 - -
Cam09g2037 648 Coils Coil 514 541 - -
Cam09g2037 648 Gene3D - 71 126 - -
Cam09g2037 648 Gene3D - 192 366 - -
Cam09g2037 648 MobiDBLite consensus disorder prediction 621 648 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 209 219 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 337 353 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 396 415 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 8 21 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 477 493 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 36 48 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 146 166 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 369 389 - -
Cam09g2037 648 PRINTS 70kDa heat shock protein signature 58 66 - -
Cam09g2037 648 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cam09g2037 648 Gene3D - 546 619 IPR029048 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2037 Cam-Chr9:34932090 Cam09g2043 Cam-Chr9:34969749 0.00E+00 proximal
Cam01g0183 Cam-Chr1:2177294 Cam09g2037 Cam-Chr9:34932090 1.30E-230 transposed
Cam03g1034 Cam-Chr3:18677996 Cam09g2037 Cam-Chr9:34932090 3.80E-14 transposed
Cam05g0599 Cam-Chr5:5257937 Cam09g2037 Cam-Chr9:34932090 6.50E-77 transposed
Cam05g1606 Cam-Chr5:22691935 Cam09g2037 Cam-Chr9:34932090 9.90E-73 transposed
Cam06g1107 Cam-Chr6:18760145 Cam09g2037 Cam-Chr9:34932090 1.10E-142 transposed
Cam09g0995 Cam-Chr9:10335344 Cam09g2037 Cam-Chr9:34932090 1.70E-141 transposed
Cam10g0957 Cam-Chr10:21562687 Cam09g2037 Cam-Chr9:34932090 1.70E-156 transposed
Cam11g1151 Cam-Chr11:22594103 Cam09g2037 Cam-Chr9:34932090 0.00E+00 transposed
Cam11g1702 Cam-Chr11:29683335 Cam09g2037 Cam-Chr9:34932090 2.80E-56 transposed
Cam04g0896 Cam-Chr4:23083609 Cam09g2037 Cam-Chr9:34932090 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2037 K03283 - csv:101211905 1228.39