Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2042 ATGGAATTTGCCGACGAGCTCACGGCCGGAGCCACCGCCTCCAATTCCAACCGCCACAAGCCCTCCGATACTAGAGACAGCGGCGAGCTCTCATCTTCCGACAACGACACCGAAGATGTACATCCTGTTTTTTCTAACATGCCCGCTTCACTTGCACCACCAGTGTTTCCCACTCTTCCTCTGCAAAGTAAAAGTAATGTAGCGATTCAGGCTGATATGGATGATAAATTGGAGACAATACAAAATATATGTCAGAAAATTGTGGACACCACAAACTTGTACTCATTTTCTAAATTGGATGACCAGCAAGTATATTCTCTTATGAGGCTGAGGGAAATTTCTCATCGAATTATCAATGACCGTGATTCAAGGGTGACAAGAAATGATGTGATTAGTGCTATGTGTTTTTACATCAACGGGCTGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAAGATGTCATATAAAGACTTGGATGACCAGCAAATGCAACAGCTATTGAGATTGAAAGAGCTCCTATGTGGGATTGTAGATGGAGCTAAAGACGTGGAAACTGAACCTTCCCATATTGTTGAACAGGGCATGGTAAGTGATATGTGGACGACTGAGAGTTTGGAGGTTGAGCCACTTGATTCCTGCAATGATGATGTACCACTTGGAGAGACACAAATTGTGATGGTTGAAGATGAACAGGCAGTAGCTGAAGTTAGGCTTGAGAATCAATATTGTGACCCACATGTTAAACACTCAGTCAGTTGGCCAAAAAATGGTAGCTTAACCTTAGAGTGGGTTGTAGAGATGATGAAAACTCTCGAGCTGTCTTCAAGAAACTACTCACCTGCGGAGTTTCAACTTATCATGCCAGTTTCTGTGGTAGATTCAATACTTGATGTAGCTGCGAGTATCCTTCACAAGGAACCAAACTGCGTGGAAGTTGACTGCCATGGAGAAGTTTCAAAAGTGGTTATAGTTGGGGACATTCATGGACATTATCATGACTTACTTCATCTATTTGAACTTGCTAATTTGCCATCTAAAAGCCAGTATTTCGTTTTTAATGGTAATTATGTGGACAGAGGAGCATGGGGACTTGAGGTGTTTTTGGTCTTATTGGCATGGAAGATCTTGATGCCTGATAGAGTATATATGCTCCGTGGAAATCATGAAACCAGAAGTTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAAAGTATATCACAGGTGCTTGGAAACGTTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACAACACATGGAGGGTTATTTCGTAAACCATGCAATCCTGATGTGCAGAATGACAAGGAAAGGAAAACGCAGAAGCTGGAGATTGGATCCTTGCAAGACTTATCTAAGCTTGAAAGGTTTTTTATTGACATTCCAACTGAAGATGAAGATCCAAATATAGTTTTGGCAGATGTATTGTGGTCGGATCCTTCTAAGGTAGATGGTTTAAGGGAAAATCAAGCCAGAGGAGCGGGCCTACTGTGGGGTCCTGATTCTACTGAAGCATTCTTAAAGCTGTCCAATTTAAAGTTGATCATTAGGTCACATGAAGGCCCAGATTCAAGGGACGGTAAGATTGATTTTGATGATATGATAATGGGTTATAGCACAGATCACGACATAGAATCAGGGAAATTATATACTCTATTTAGCGCTCCAGATTTCCCTCAGTTTGGTCAGAAGAGTTATAATAATGAGGGAGCATATGCTACTTTGAAGCATCCAGATTTTGAAACTCCATCTTTCCATACATTTAAAGCTGTAGATAAACCGAAGATAGACGTTTGCTATTTTGGTTGTGAAGGACATGATGTAGATTTAGATTTGACATTAATGGCTCTAGCTGATGCTGTCTCTTCTAACAACTCTAGTCCTATTGAGATTCATTCTGGGGTTGATTTTGAGGCATTAGGCATATTAAACCCACCTTCTTGGAGCATTACATTGACAGATGATACTACAGGTACCCAAAATGTTCAGATTCCGAAGGCTCCCATGGTAGAAGGGCTGCCTTTGCCGCCTAGCATAGAGGAACCTCATAAGGCTGCTTATGAATACTTCTTGGAGCTCATTGCAGGACTGAAATTTATGCTCCAGACAATGGAAAATAAAAACAAGATTCATATTTCTCATCGGAAGAGGAAGAAATGCAATTAG 2229 40.92 MEFADELTAGATASNSNRHKPSDTRDSGELSSSDNDTEDVHPVFSNMPASLAPPVFPTLPLQSKSNVAIQADMDDKLETIQNICQKIVDTTNLYSFSKLDDQQVYSLMRLREISHRIINDRDSRVTRNDVISAMCFYINGLAGKCKDIVDILNKMSYKDLDDQQMQQLLRLKELLCGIVDGAKDVETEPSHIVEQGMVSDMWTTESLEVEPLDSCNDDVPLGETQIVMVEDEQAVAEVRLENQYCDPHVKHSVSWPKNGSLTLEWVVEMMKTLELSSRNYSPAEFQLIMPVSVVDSILDVAASILHKEPNCVEVDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQYFVFNGNYVDRGAWGLEVFLVLLAWKILMPDRVYMLRGNHETRSCTSSYGFEKEVRTKYGEQGEKVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNDKERKTQKLEIGSLQDLSKLERFFIDIPTEDEDPNIVLADVLWSDPSKVDGLRENQARGAGLLWGPDSTEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSTDHDIESGKLYTLFSAPDFPQFGQKSYNNEGAYATLKHPDFETPSFHTFKAVDKPKIDVCYFGCEGHDVDLDLTLMALADAVSSNNSSPIEIHSGVDFEALGILNPPSWSITLTDDTTGTQNVQIPKAPMVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTMENKNKIHISHRKRKKCN 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34960670 34968486 + CaPI482276_09g020420.1 Cam09g2042 136371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2042 742 ProSitePatterns Serine/threonine specific protein phosphatases signature. 386 391 IPR006186 GO:0016787(InterPro)
Cam09g2042 742 PRINTS Serine/threonine phosphatase family signature 352 379 IPR006186 GO:0016787(InterPro)
Cam09g2042 742 PRINTS Serine/threonine phosphatase family signature 569 585 IPR006186 GO:0016787(InterPro)
Cam09g2042 742 PRINTS Serine/threonine phosphatase family signature 385 409 IPR006186 GO:0016787(InterPro)
Cam09g2042 742 PRINTS Serine/threonine phosphatase family signature 422 448 IPR006186 GO:0016787(InterPro)
Cam09g2042 742 PRINTS Serine/threonine phosphatase family signature 322 349 IPR006186 GO:0016787(InterPro)
Cam09g2042 742 PRINTS Serine/threonine phosphatase family signature 475 502 IPR006186 GO:0016787(InterPro)
Cam09g2042 742 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 211 620 IPR051134 -
Cam09g2042 742 SUPERFAMILY Metallo-dependent phosphatases 277 617 IPR029052 -
Cam09g2042 742 Pfam Calcineurin-like phosphoesterase 322 541 IPR004843 GO:0016787(InterPro)
Cam09g2042 742 Gene3D - 221 625 IPR029052 -
Cam09g2042 742 MobiDBLite consensus disorder prediction 1 46 - -
Cam09g2042 742 SMART pp2a_7 289 613 IPR006186 GO:0016787(InterPro)
Cam09g2042 742 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2042 Cam-Chr9:34960670 Cam10g0010 Cam-Chr10:1753465 1.10E-113 dispersed
Cam09g2042 Cam-Chr9:34960670 Cam09g2047 Cam-Chr9:35012343 1.80E-10 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2042 K04460 - csv:101211172 1407.89