Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2043 ATGGCCGGTAAAGGAGAAGGTCCGGCAATTGGAATCGATCTTGGAACCACCTACTCTTGCGTCGGTGTGTGGCAGCATGATCGAGTTGAGATCATAGCCAACGACCAGGGCAACAGGACCACGCCGTCGTATGTTGCTTTCACCGACACTGAACGCTTGATCGGTGATGCGGCCAAGAATCAGGTCGCCATGAACCCTATTAACACCGTTTTTGATGCTAAGCGTTTAATTGGCCGAAGATTTAGCGATCCATCGGTCCAGAGTGATATCAAGCTCTGGCCATTTAAAGTTATTGCCGGCCCTAGTGACAAACCCATGATTGTTGTAAACTACAAGGGTGAAGAGAAGCAGTTTTCGGCTGAAGAAATCTCTTCTATGGTGCTCATAAAGATGAAGGAGATTGCCGAGGCGTATTTGGGAACAACAGTGAAGAACGCCGTCGTCACTGTCCCAGCCTACTTCAACGATTCACAGAGACAGGCCACCAAGGACGCCGGGGTCATTTCAGGTCTAAATGTAATGCGTATCATCAATGAACCAACTGCTGCCGCCATTGCTTATGGTCTCGACAAGAAGTCCAGCAGCTCCGGTGAAAAGAATGTTCTAATTTTTGATCTGGGCGGTGGTACCTTTGATGTTTCATTGCTCACAATCGAAGAAGGTATCTTTGAGGTGAAAGCAACTGCAGGAGACACTCATCTGGGTGGTGAAGATTTTGATAACAGATTGGTTAACCACTTCGTGCAAGAATTCAAGAGAAAGAATAAGAAAGACATTAGTGGGAATCCCAGGGCTCTTAGGAGATTGAGAACTGCTTGTGAAAGGGCTAAGAGGACACTTTCTTCTACAGCTCAAACTACAATTGAGATTGACTCTCTTTACGAAGGAATTGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAATATGGATCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGCTTGAGAGATGCTAAGATGGACAAAAGCAGTGTCCATGATGTTGTTCTTGTTGGTGGTTCCACTAGAATTCCCAAGGTGCAGCAATTGTTGCAGGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGAGCTGCTGTCCAAGCTGCCATCTTGAGCGGTGAGGGTAATGAGAAGGTTCAAGATCTTCTGCTTTTGGATGTTACCCCTCTTTCACTTGGACTTGAAACAGCCGGCGGTGTTATGACTGTCTTGATTCCAAGGAATACCACCATCCCCACCAAGAAAGAACAAGTTTTCTCTACATACTCTGACAATCAACCTGGTGTTTTGATCCAAGTCTATGAAGGTGAGAGAGCAAGAACTCGCGACAACAACTTGCTTGGAAAATTTGAGCTTTCCGGAATCCCTCCAGCCCCTAGAGGTGTTCCTCAGATCACAGTCTGCTTCGACATTGATGCCAACGGTATTCTGAATGTTTCTGCCGAGGATAAAACCACCGGACAGAAGAACAAGATCACAATCACCAACGACAAGGGGCGGTTGTCGAAGGAAGAGATTGAGAAGATGGTGCAAGAAGCAGAGAAATACAAGGCCGACGATGAAGAACACAAGAAGAAAGTTGAATCTAAGAACTCGTTGGAGAACTATGCTTATAACATGAGAAACACTGTGAGGGATGAGAAGTTCAGCTCAAAATTGGACCCGGCGGACAAGAAGAAGATCGAGGATGCCATCGAACAGGCAATCCAATGGCTTGACAACAACCAACTTGCTGAGGCTGATGAGTTTGAAGACAAGATGAAAGAGCTTGAGAGTATTTGCAACCCAATTGTTGCTAAGATGTACCAGGGTGCTGGTGGGCCTGGCATGGGCGGTGCCGGTATGGATGACGATGATGTTCCTCCTCCGTCCGGTGGTAGCGGCGCCGGTCCTAAGATCGAGGAAGTTGACTAA 1959 46.55 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIAGPSDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVESKNSLENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAIQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGAGGPGMGGAGMDDDDVPPPSGGSGAGPKIEEVD 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34969749 34972105 - CaPI482276_09g020430.1 Cam09g2043 136372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2043 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cam09g2043 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 625 IPR029048 -
Cam09g2043 652 Coils Coil 521 541 - -
Cam09g2043 652 FunFam Heat shock 70 kDa protein 198 261 - -
Cam09g2043 652 Gene3D - 71 126 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 58 66 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 396 415 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 8 21 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 36 48 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 209 219 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 337 353 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 146 166 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 369 389 - -
Cam09g2043 652 PRINTS 70kDa heat shock protein signature 477 493 - -
Cam09g2043 652 Gene3D - 546 619 IPR029048 -
Cam09g2043 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cam09g2043 652 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cam09g2043 652 FunFam Heat shock 70 kDa protein 539 652 - -
Cam09g2043 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cam09g2043 652 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cam09g2043 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cam09g2043 652 Gene3D - 10 384 - -
Cam09g2043 652 MobiDBLite consensus disorder prediction 618 652 - -
Cam09g2043 652 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Cam09g2043 652 FunFam Heat shock protein 70 10 197 - -
Cam09g2043 652 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Cam09g2043 652 Gene3D Actin; Chain A, domain 4 235 318 - -
Cam09g2043 652 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cam09g2043 652 FunFam Heat shock 70 kDa 391 545 - -
Cam09g2043 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Cam09g2043 652 Gene3D - 192 366 - -
Cam09g2043 652 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cam09g2043 652 FunFam Heat shock 70 kDa 235 318 - -
Cam09g2043 652 FunFam Heat shock 70 kDa protein 71 126 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0896 Cam-Chr4:23083609 Cam09g2043 Cam-Chr9:34969749 0.00E+00 dispersed
Cam05g0599 Cam-Chr5:5257937 Cam09g2043 Cam-Chr9:34969749 1.50E-76 dispersed
Cam09g2043 Cam-Chr9:34969749 Cam11g1151 Cam-Chr11:22594103 0.00E+00 dispersed
Cam09g2037 Cam-Chr9:34932090 Cam09g2043 Cam-Chr9:34969749 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2043 K03283 - csv:101210925 1219.91