Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g2052 | ATGGAGAAGGCAAAGCCATATTTGGGAGCAATTGCATTAAGGTTTGCTTCAGCAGGAATGTCAATTATTTCAAAGGCTGCTCTAAACCAAGGAATGAACCAACTTGTTACCATTGTTTATCGTTACTCTATTGGTGCCATTGTTGTTGCTCCTTTTGCTTTTGTATTGGATAGGAAAATAAGACCAAAGATGACTCTCCCGATCTTCGCCAAGATTCTTCTCCTTGGCTTACTCGAGCCTGTAATAGCCCAGAGCTTGATTTACTCTGCTACTAAATACACAACTGCTACTTTTGCAACTGCCATGTGCAATATTCTTCCTGCCTTTGCATTTCTAATGGCTTGGATTTGTAGAATGGAGAAGGTGAACATTAGAAGATTAAGAAGCCAGGCAAAGATTTTAGGGACTTTAGTTACAGTTGGAGGAGCAATGATGATGGCTCTTATAAAAGGGCCTTTATTGAGTTTGCCTTGGACCAAACAAAATTTCAATAATCCTCATTCTTATTCCACTCTTCCAAATAACCAACAACCTCTTAAGGCTGCCATTGTTATCACCATTTCAAGTATTTGTTCCTCAGCCTTCACCATTCTTCTGGCACATACAATAAGAACATACCCAGCTGAGCTCACACTAACAACATTCATATGTTTGGCTGGAGCTGTGGAAAGTACTATTTTAGCCTTAGCATTTGAATGGGACAATCCATCTGCATGGGCTTTACATGCAGATTCCATACTCTTGGCTGCCCTCTATGGTGGTATAATATCTTCTGGAATTGCCTATTATCTTCAAGGAGTAGTGGTGAAGTTAAAAGGACCTGTGTTTGTAACTGCATTCAATCCTCTCAGCATGGTCATAGTTGCCATAATTAGTTCATTCATATTTGCCGAGACACTGCGCTTAGGAAGGGTCATTGGAGCAGTTGTGATAATTATAGGCCTTTACTTGGTTTTGTGGGGCAAGAGCAAAGATAAACTTCCATTCAAAGTGGAGAATGACAATAATAATAATAATAATAATAATAATGAATTGCCAATTTCACTCCAAGACTCAACAACCACAAACCAGCAGCTGAAGCCTTTAGATCAACAATAA | 1098 | 39.25 | MEKAKPYLGAIALRFASAGMSIISKAALNQGMNQLVTIVYRYSIGAIVVAPFAFVLDRKIRPKMTLPIFAKILLLGLLEPVIAQSLIYSATKYTTATFATAMCNILPAFAFLMAWICRMEKVNIRRLRSQAKILGTLVTVGGAMMMALIKGPLLSLPWTKQNFNNPHSYSTLPNNQQPLKAAIVITISSICSSAFTILLAHTIRTYPAELTLTTFICLAGAVESTILALAFEWDNPSAWALHADSILLAALYGGIISSGIAYYLQGVVVKLKGPVFVTAFNPLSMVIVAIISSFIFAETLRLGRVIGAVVIIIGLYLVLWGKSKDKLPFKVENDNNNNNNNNNELPISLQDSTTTNQQLKPLDQQ | 365 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 35074539 | 35077766 | + | CaPI482276_09g020520.1 | Cam09g2052 | 136381 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g2052 | 365 | MobiDBLite | consensus disorder prediction | 332 | 365 | - | - | |
Cam09g2052 | 365 | PANTHER | WAT1-RELATED PROTEIN | 11 | 336 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Cam09g2052 | 365 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 248 | 324 | - | - | |
Cam09g2052 | 365 | Pfam | EamA-like transporter family | 180 | 319 | IPR000620 | GO:0016020(InterPro) | |
Cam09g2052 | 365 | Pfam | EamA-like transporter family | 7 | 145 | IPR000620 | GO:0016020(InterPro) | |
Cam09g2052 | 365 | MobiDBLite | consensus disorder prediction | 331 | 365 | - | - | |
Cam09g2052 | 365 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 40 | 148 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam09g2052 | Cam-Chr9:35074539 | Cam09g2054 | Cam-Chr9:35133033 | 5.80E-103 | dispersed | |
Cam09g2052 | Cam-Chr9:35074539 | Cam09g2053 | Cam-Chr9:35103278 | 6.00E-92 | tandem | |
Cam04g0881 | Cam-Chr4:22949554 | Cam09g2052 | Cam-Chr9:35074539 | 4.30E-101 | wgd | |
Cam07g0312 | Cam-Chr7:4171164 | Cam09g2052 | Cam-Chr9:35074539 | 1.80E-104 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g2052 | - | - | - | 0.0 |