Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2052 ATGGAGAAGGCAAAGCCATATTTGGGAGCAATTGCATTAAGGTTTGCTTCAGCAGGAATGTCAATTATTTCAAAGGCTGCTCTAAACCAAGGAATGAACCAACTTGTTACCATTGTTTATCGTTACTCTATTGGTGCCATTGTTGTTGCTCCTTTTGCTTTTGTATTGGATAGGAAAATAAGACCAAAGATGACTCTCCCGATCTTCGCCAAGATTCTTCTCCTTGGCTTACTCGAGCCTGTAATAGCCCAGAGCTTGATTTACTCTGCTACTAAATACACAACTGCTACTTTTGCAACTGCCATGTGCAATATTCTTCCTGCCTTTGCATTTCTAATGGCTTGGATTTGTAGAATGGAGAAGGTGAACATTAGAAGATTAAGAAGCCAGGCAAAGATTTTAGGGACTTTAGTTACAGTTGGAGGAGCAATGATGATGGCTCTTATAAAAGGGCCTTTATTGAGTTTGCCTTGGACCAAACAAAATTTCAATAATCCTCATTCTTATTCCACTCTTCCAAATAACCAACAACCTCTTAAGGCTGCCATTGTTATCACCATTTCAAGTATTTGTTCCTCAGCCTTCACCATTCTTCTGGCACATACAATAAGAACATACCCAGCTGAGCTCACACTAACAACATTCATATGTTTGGCTGGAGCTGTGGAAAGTACTATTTTAGCCTTAGCATTTGAATGGGACAATCCATCTGCATGGGCTTTACATGCAGATTCCATACTCTTGGCTGCCCTCTATGGTGGTATAATATCTTCTGGAATTGCCTATTATCTTCAAGGAGTAGTGGTGAAGTTAAAAGGACCTGTGTTTGTAACTGCATTCAATCCTCTCAGCATGGTCATAGTTGCCATAATTAGTTCATTCATATTTGCCGAGACACTGCGCTTAGGAAGGGTCATTGGAGCAGTTGTGATAATTATAGGCCTTTACTTGGTTTTGTGGGGCAAGAGCAAAGATAAACTTCCATTCAAAGTGGAGAATGACAATAATAATAATAATAATAATAATAATGAATTGCCAATTTCACTCCAAGACTCAACAACCACAAACCAGCAGCTGAAGCCTTTAGATCAACAATAA 1098 39.25 MEKAKPYLGAIALRFASAGMSIISKAALNQGMNQLVTIVYRYSIGAIVVAPFAFVLDRKIRPKMTLPIFAKILLLGLLEPVIAQSLIYSATKYTTATFATAMCNILPAFAFLMAWICRMEKVNIRRLRSQAKILGTLVTVGGAMMMALIKGPLLSLPWTKQNFNNPHSYSTLPNNQQPLKAAIVITISSICSSAFTILLAHTIRTYPAELTLTTFICLAGAVESTILALAFEWDNPSAWALHADSILLAALYGGIISSGIAYYLQGVVVKLKGPVFVTAFNPLSMVIVAIISSFIFAETLRLGRVIGAVVIIIGLYLVLWGKSKDKLPFKVENDNNNNNNNNNELPISLQDSTTTNQQLKPLDQQ 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35074539 35077766 + CaPI482276_09g020520.1 Cam09g2052 136381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2052 365 MobiDBLite consensus disorder prediction 332 365 - -
Cam09g2052 365 PANTHER WAT1-RELATED PROTEIN 11 336 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam09g2052 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 324 - -
Cam09g2052 365 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020(InterPro)
Cam09g2052 365 Pfam EamA-like transporter family 7 145 IPR000620 GO:0016020(InterPro)
Cam09g2052 365 MobiDBLite consensus disorder prediction 331 365 - -
Cam09g2052 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2052 Cam-Chr9:35074539 Cam09g2054 Cam-Chr9:35133033 5.80E-103 dispersed
Cam09g2052 Cam-Chr9:35074539 Cam09g2053 Cam-Chr9:35103278 6.00E-92 tandem
Cam04g0881 Cam-Chr4:22949554 Cam09g2052 Cam-Chr9:35074539 4.30E-101 wgd
Cam07g0312 Cam-Chr7:4171164 Cam09g2052 Cam-Chr9:35074539 1.80E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2052 - - - 0.0