Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2054 ATGGAGCATCCCGCCGGAATGTTGAATCAGGCAAAGCCATTTATTGCAGTGATTCTTCAGCAATTCATCTCTGCCGGAATGGTCATCATTTCCAAGTTGGCTCTCAACCAAGGACTCAACCAGCACGTTTTAGTCGTCTACCGCTACACCATTGCTACCATTGTCGTCGCTCCGTTCGCTTTCATCTTCGAGAGGAAAGTGAGACCCAAGATGACTTGGTCCATTTTTGGGAAGGTTGTGTTACTGGGACTATTGGAGCCTGCACTAGACCAAAACTTGTATTATACAGGCATGAAGTACACTACAGCAACCTTTGCATCCGCTATGACTAATATGGTCCCTGGCCTCGTCTTCCTCATGGCTTGGCTTGTTCGGCTTGAGAAGGTTGACGTAAGGCAGTTGTCGAGCCAGGCGAAGATATTAGGAACAGTGGTGGCAGTGGGAGGGGCGATGATAATGACTCTGGTAAGAGGACCAATCTTGAATCTGCCATGGACAAATCACAACCTCCATGACCATTCTGCAGCTGCAACTAACCAGCAAGATCTTCTCAAGGGTTCTCTCATGATCACTATTGGTTGTATTCTTTGGTCTGTTTTCAATGTTCTTCAGGCAATTACAGTAAAAGTATACCCAGCACAACTCTCCTTAACAGCTTTGATATGCTTCACCGGCGCCATACAAGCCTCAGTAATAGCTTTCGCAATGGAAGGGCACAAACCTGCGGCCTGGTCATTACATTTAGATTCAACCCTCTTAGCTCCTTTGTATAGTGGAATCATGTCTTCAGGGGTTTCATATACTATCCAAGCAGCAGTAATGAAAAGGAAAGGGCCAGTTTTTGCAAGTACATTTAGTCCCCTGAGCATGATTATTGTTGCAATCATTAGTTCATTCGCATTATCCGAGATATTATACTTTGGAAGGGTTATTGGAGCAGCTGTAATTATTACAGGCCTTTATTTGGTTCTGTGGGGTAAAATCAAGGATCACGCTCTATACAAATCAGATAGTGAGAAGATGGCCCCACCAGATCAGAAACTGACTGCCATAACTGACAAACCTAAGACTTCAGATAAAGAACTAGGAGTTGATCTTGCTAGGATAAAAACAGTGGATGATTCTGTTTGA 1131 44.21 MEHPAGMLNQAKPFIAVILQQFISAGMVIISKLALNQGLNQHVLVVYRYTIATIVVAPFAFIFERKVRPKMTWSIFGKVVLLGLLEPALDQNLYYTGMKYTTATFASAMTNMVPGLVFLMAWLVRLEKVDVRQLSSQAKILGTVVAVGGAMIMTLVRGPILNLPWTNHNLHDHSAAATNQQDLLKGSLMITIGCILWSVFNVLQAITVKVYPAQLSLTALICFTGAIQASVIAFAMEGHKPAAWSLHLDSTLLAPLYSGIMSSGVSYTIQAAVMKRKGPVFASTFSPLSMIIVAIISSFALSEILYFGRVIGAAVIITGLYLVLWGKIKDHALYKSDSEKMAPPDQKLTAITDKPKTSDKELGVDLARIKTVDDSV 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35133033 35135357 + CaPI482276_09g020540.1 Cam09g2054 136383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2054 376 PANTHER WAT1-RELATED PROTEIN 15 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam09g2054 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 328 - -
Cam09g2054 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cam09g2054 376 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020(InterPro)
Cam09g2054 376 Pfam EamA-like transporter family 15 152 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0312 Cam-Chr7:4171164 Cam09g2054 Cam-Chr9:35133033 4.60E-108 dispersed
Cam07g0313 Cam-Chr7:4208202 Cam09g2054 Cam-Chr9:35133033 1.10E-109 dispersed
Cam09g2052 Cam-Chr9:35074539 Cam09g2054 Cam-Chr9:35133033 5.80E-103 dispersed
Cam09g2054 Cam-Chr9:35133033 Cam11g1590 Cam-Chr11:28644389 1.60E-84 dispersed
Cam09g2053 Cam-Chr9:35103278 Cam09g2054 Cam-Chr9:35133033 1.90E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2054 - - - 0.0